RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CCT4P50991 539 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 NLRP5P59047 1200 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 MPP1Q00013 466 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 ODF1Q14990 250 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 FBXW10Q5XX13 1052 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 LHX8Q68G74 356 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 LIN54Q6MZP7 749 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 C3orf67Q6ZVT6 689 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 ALYREFQ86V81 257 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 VPS37DQ86XT2 251 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 NKAPQ8N5F7 415 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 AADATQ8N5Z0 425 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 SPERTQ8NA61 448 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 FBF1Q8TES7 1133 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 FNIP1Q8TF40 1166 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 FAM151AQ8WW52 585 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 CNDP2Q96KP4 475 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 DEFB118Q96PH6 123 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 POP1Q99575 1024 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 POLMQ9NP87 494 aaPredicted RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 TBC1D22BQ9NU19 505 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 TMOD2Q9NZR1 351 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 ATXN10Q9UBB4 475 aa5.46□□□□□ -1.53
UBE3D-202ENST00000369746 PAIP2BQ9ULR5 123 aaKnown RBP5.46□□□□□ -1.53
UBE3D-202ENST00000369746 AK9Q5TCS8 1911 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC192P0DO97 292 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PRKAR2AP13861 404 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 AKR1B1P15121 316 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 TMEM11P17152 192 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 TYRP1P17643 537 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CST5P28325 142 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 LIG3P49916 1009 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ZNF75DP51815 510 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 KLHL30Q0D2K2 578 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PRKG2Q13237 762 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 IFIT5Q13325 482 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 RIPK1Q13546 671 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 BLMHQ13867 455 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 BTG3Q14201 252 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 OASLQ15646 514 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 GFOD2Q3B7J2 385 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MMEL1Q495T6 779 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SH2D4BQ5SQS7 431 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MORN1Q5T089 497 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 METTL11BQ5VVY1 283 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ATF7IPQ6VMQ6 1270 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 FCHSD1Q86WN1 690 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ZBTB8BQ8NAP8 495 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC148Q8NFR7 591 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SCG3Q8WXD2 468 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MYLIPQ8WY64 445 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SMC6Q96SB8 1091 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 TSC22D3Q99576 134 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CHCHD6Q9BRQ6 235 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PARD6BQ9BYG5 372 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 IMPACTQ9P2X3 320 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PCDHB15Q9Y5E8 787 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SALL1Q9NSC2 1324 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 C17orf113A0A1B0GUU1 675 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 STMND1H3BQB6 276 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 H3BQF6 201 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 NDC80O14777 642 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MEFVO15553 781 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ZSCAN12O43309 604 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 COBLO75128 1261 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 WEE1P30291 646 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 IDUAP35475 653 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 FLT3LGP49771 235 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PEX5P50542 639 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 INHBCP55103 352 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 UBE2HP62256 183 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 KRT83P78385 493 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PURAQ00577 322 aaKnown RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ACTN3Q08043 901 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 LRP8Q14114 963 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PPP1R7Q15435 360 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 LONRF2Q1L5Z9 754 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SGSM1Q2NKQ1 1148 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MFSD14CQ5VZR4 134 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ARHGAP11AQ6P4F7 1023 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 LRRC8AQ8IWT6 810 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CNNM3Q8NE01 707 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 RASSF8Q8NHQ8 419 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 PI4K2BQ8TCG2 481 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 IRGQQ8WZA9 623 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 LRRC45Q96CN5 670 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SIL1Q9H173 461 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ZNF576Q9H609 170 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SLC39A2Q9NP94 309 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 NDFIP2Q9NV92 336 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MCM9Q9NXL9 1143 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 VPS18Q9P253 973 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ADAMTS1Q9UHI8 967 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 SH3BGRL2Q9UJC5 107 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 ZDHHC9Q9Y397 364 aa5.46□□□□□ -1.54
UBE3D-202ENST00000369746 MTF2Q9Y483 593 aaPredicted RBP5.46□□□□□ -1.54
UBE3D-202ENST00000369746 CYP2D7A0A087X1C5 515 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms