RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 GPR25O00155 361 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 CLDN3O15551 220 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 ABCD1P33897 745 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 KIF11P52732 1056 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 GJA9P57773 515 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 CLDN10P78369 228 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 MCL1Q07820 350 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 PRPF4BQ13523 1007 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 TSR1Q2NL82 804 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 CXCL17Q6UXB2 119 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 SYT10Q6XYQ8 523 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 CDT1Q9H211 546 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 ZNHIT6Q9NWK9 470 aaKnown RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 F8VZ95 297 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ASAP2O43150 1006 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 GPR32O75388 356 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 VNN1O95497 513 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 SCP2P22307 547 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 OSTNP61366 133 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 SLFN12LQ6IEE8 588 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ZNF571Q7Z3V5 609 aaPredicted RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 NLRP7Q8WX94 980 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 KREMEN1Q96MU8 473 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 PDZD7Q9H5P4 517 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 HAUS4Q9H6D7 363 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 TMEM8AQ9HCN3 771 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 DUSP10Q9Y6W6 482 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 FAM170AA1A519 330 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ADAMTS4O75173 837 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 GFPT2O94808 682 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 HOXC8P31273 242 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 PHKA2P46019 1235 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 PTK2Q05397 1052 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ASIC2Q16515 512 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 TCHPQ9BT92 498 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 SRRDQ9UH36 339 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
HMGCS2-201ENST00000369406 PMM2O15305 246 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 SEPT4O43236 478 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 TSPAN1O60635 241 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 C4BPAP04003 597 aaKnown RBP15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 CYP2C9P11712 490 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 GNASQ5JWF2 1037 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 KRT39Q6A163 491 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 MPZL3Q6UWV2 235 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 TMEM40Q8WWA1 233 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 DNAJB3Q8WWF6 145 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 TATDN2Q93075 761 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 WNT8BQ93098 351 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 SPAG5Q96R06 1193 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 TSKSQ9UJT2 592 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 CPSF3Q9UKF6 684 aaKnown RBP15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.04
HMGCS2-201ENST00000369406 FOXN3O00409 490 aaPredicted RBP15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 LCA5LO95447 670 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 SERPING1P05155 500 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 POU5F1BQ06416 359 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 FAM187BQ17R55 369 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 ZNF568Q3ZCX4 644 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 CCDC170Q8IYT3 715 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 CCDC42Q96M95 316 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 CXCL16Q9H2A7 254 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 ACP6Q9NPH0 428 aa15.27■□□□□ 0.03
HMGCS2-201ENST00000369406 A0A087X0T9 212 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 RRN3P2A6NIE6 340 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 P4HA2O15460 535 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 FAM228BP0C875 321 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 TMOD1P28289 359 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 DHX38Q92620 1227 aaKnown RBP15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 OSMRQ99650 979 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 ARID3AQ99856 593 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 STK33Q9BYT3 514 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 TNFSF13BQ9Y275 285 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 RALGAPA2Q2PPJ7 1873 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 OGTO15294 1046 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms