RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CCDC113Q9H0I3 377 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 PDZD7Q9H5P4 517 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 DUSP12Q9UNI6 340 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 H0Y858 1186 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 ACKR2O00590 384 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 PTGESO14684 152 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 N4BP3O15049 544 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 TADA2AO75478 443 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 SPATA31D3P0C874 917 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 NAMPTP43490 491 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 CREMQ03060 361 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 TUSC3Q13454 348 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 MAPK6Q16659 721 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 SPATA31D4Q6ZUB0 917 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 C4orf32Q8N8J7 132 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 FBXO18Q8NFZ0 1043 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 RIN2Q8WYP3 895 aaPredicted RBP17.7■□□□□ 0.42
CKS1B-202ENST00000368436 NT5C3AQ9H0P0 336 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 ZDHHC7Q9NXF8 308 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 EPS15L1Q9UBC2 864 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 CACNG4Q9UBN1 327 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
CKS1B-202ENST00000368436 CLUHO75153 1309 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 TRIP11Q15643 1979 aa17.7■□□□□ 0.42
CKS1B-202ENST00000368436 VWA8A3KMH1 1905 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 ARHGEF35A5YM69 484 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 PROB1E7EW31 1015 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 MYBP10242 640 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 NPR3P17342 541 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 PRPF4BQ13523 1007 aaKnown RBP17.69■□□□□ 0.42
CKS1B-202ENST00000368436 NAB2Q15742 525 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 TTC38Q5R3I4 469 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
CKS1B-202ENST00000368436 SMG7Q92540 1137 aaKnown RBP17.69■□□□□ 0.42
CKS1B-202ENST00000368436 STAMQ92783 540 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 MFSD1Q9H3U5 465 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
CKS1B-202ENST00000368436 SF3B1O75533 1304 aaKnown RBP eCLIP17.69■□□□□ 0.42
CKS1B-202ENST00000368436 EDN1P05305 212 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 PRKCBP05771 671 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 THP07101 528 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
CKS1B-202ENST00000368436 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
CKS1B-202ENST00000368436 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
CKS1B-202ENST00000368436 FXR2P51116 673 aaKnown RBP eCLIP17.68■□□□□ 0.42
CKS1B-202ENST00000368436 PPP2R5AQ15172 486 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 ECM1Q16610 540 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 MYADMQ96S97 322 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 PRKD2Q9BZL6 878 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
CKS1B-202ENST00000368436 CASTOR2A6NHX0 329 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 ST18O60284 1047 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 ZMYND10O75800 440 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 RECQL4O94761 1208 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 KIF4AO95239 1232 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 AOC1P19801 751 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 HMGN5P82970 282 aaKnown RBP17.67■□□□□ 0.42
CKS1B-202ENST00000368436 PDIA5Q14554 519 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 EEF1DP3Q658K8 133 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 HAUS3Q68CZ6 603 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 PRSS55Q6UWB4 352 aaPredicted RBP17.67■□□□□ 0.42
CKS1B-202ENST00000368436 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 DEPTORQ8TB45 409 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 PIK3R5Q8WYR1 880 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 NXPE3Q969Y0 559 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
CKS1B-202ENST00000368436 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 PIDD1Q9HB75 910 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 USP20Q9Y2K6 914 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
CKS1B-202ENST00000368436 USP34Q70CQ2 3546 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 NARSO43776 548 aaKnown RBP17.66■□□□□ 0.42
CKS1B-202ENST00000368436 GFRA3O60609 400 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 EFNA5P52803 228 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 SLC44A3Q8N4M1 653 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 LNX1Q8TBB1 728 aaPredicted RBP17.66■□□□□ 0.42
CKS1B-202ENST00000368436 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 TTPALQ9BTX7 342 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 BHMT2Q9H2M3 363 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.66■□□□□ 0.42
CKS1B-202ENST00000368436 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 LRWD1Q9UFC0 647 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 FBXW11Q9UKB1 542 aa17.66■□□□□ 0.42
CKS1B-202ENST00000368436 PI15O43692 258 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 LAMP2P13473 410 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
CKS1B-202ENST00000368436 CCT6AP40227 531 aaKnown RBP17.65■□□□□ 0.42
CKS1B-202ENST00000368436 NBL1P41271 181 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 ELAVL2Q12926 359 aaKnown RBP17.65■□□□□ 0.42
CKS1B-202ENST00000368436 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 DCAF4L1Q3SXM0 396 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 NT5DC1Q5TFE4 455 aa17.65■□□□□ 0.42
CKS1B-202ENST00000368436 IGSF22Q8N9C0 903 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms