RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 PLS3P13797 630 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 KLK7P49862 253 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 EFNA5P52803 228 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RAPH1Q70E73 1250 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RHOT1Q8IXI2 618 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 TRIML2Q8N7C3 387 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RHBDL2Q9NX52 303 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 TMCC1O94876 653 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 CAV1Q03135 178 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 GRB10Q13322 594 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 ZNF449Q6P9G9 518 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RBM46Q8TBY0 533 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 EPN3Q9H201 632 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 KBTBD4Q9NVX7 518 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 ASNSD1Q9NWL6 643 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RNF181Q9P0P0 153 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 H0Y3Z8 333 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 SH3BP5O60239 455 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 PPP1R37O75864 691 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 APOEP02649 317 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 NUGGCQ68CJ6 796 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 CCDC137Q6PK04 289 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 BZW1Q7L1Q6 419 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 MMP19Q99542 508 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 IPO11Q9UI26 975 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 DYTNA2CJ06 578 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RTN2O75298 545 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 PMS2P54278 862 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 ARL4CP56559 192 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
PTPRK-204ENST00000368210 MFN1Q8IWA4 741 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 RNF149Q8NC42 400 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 IP6K2Q9UHH9 426 aa14.07□□□□□ -0.16
PTPRK-204ENST00000368210 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 GSTA1P08263 222 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 GSTA2P09210 222 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 AP3M2P53677 418 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 MKNK1Q9BUB5 465 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 SMYD2Q9NRG4 433 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 PFDN6O15212 129 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 KRT75O95678 551 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 COPB2P35606 906 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 NOP14P78316 857 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 ZDHHC15Q96MV8 337 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 MOV10L1Q9BXT6 1211 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 EIF4E1BA6NMX2 242 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 EIF3DO15371 548 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 KDM1AO60341 852 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 MMEP08473 750 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 MAGOHP61326 146 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 NAB2Q15742 525 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 SNRNP35Q16560 246 aaKnown RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 AGBL1Q96MI9 1066 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 PCSK1NQ9UHG2 260 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 TTC7AQ9ULT0 858 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 GNAT1P11488 350 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 CYP11B2P19099 503 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 PCGF5Q86SE9 256 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 FAF2Q96CS3 445 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 POLR3CQ9BUI4 534 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-204ENST00000368210 KLC2Q9H0B6 622 aa14.06□□□□□ -0.16
PTPRK-204ENST00000368210 BAZ2BQ9UIF8 2168 aaKnown RBP14.05□□□□□ -0.16
PTPRK-204ENST00000368210 KRT7P08729 469 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 KLHL23Q8NBE8 558 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 KCNH7Q9NS40 1196 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 FAM205AQ6ZU69 1335 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 IQANK1A0A1B0GTG1 560 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 WDR91A4D1P6 747 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 MAPK13O15264 365 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 MSH4O15457 936 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 AP5Z1O43299 807 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 GGPS1O95749 300 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 H2AFXP16104 143 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-204ENST00000368210 ASPHQ12797 758 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 ARL13BQ3SXY8 428 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 REXO1L1PQ8IX06 675 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 MAGED2Q9UNF1 606 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-204ENST00000368210 M0QYV0 167 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 CIITAP33076 1130 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 ACOT2P49753 483 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 IRAK1P51617 712 aa14.05□□□□□ -0.16
PTPRK-204ENST00000368210 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
PTPRK-204ENST00000368210 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
PTPRK-204ENST00000368210 KCNV1Q6PIU1 500 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms