RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 GSC2O15499 205 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 CDH16O75309 829 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 PYGMP11217 842 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 FGFR1P11362 822 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 CCDC142Q17RM4 750 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 PALB2Q86YC2 1186 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 SLC13A5Q86YT5 568 aaPredicted RBP8.34□□□□□ -1.08
CD46-207ENST00000367041 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.08
CD46-207ENST00000367041 MXD3Q9BW11 206 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 RAB34Q9BZG1 259 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 VCX3BQ9H321 246 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 VCX3AQ9NNX9 186 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 SLCO1B3Q9NPD5 702 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 UBN1Q9NPG3 1134 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 TBC1D7Q9P0N9 293 aa8.34□□□□□ -1.08
CD46-207ENST00000367041 NPHP3-ACAD11A0A0J9YXS1 232 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 PDXKO00764 312 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 CDK7P50613 346 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 SLC12A3P55017 1021 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 DNAJC3Q13217 504 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 KIF22Q14807 665 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 LIN52Q52LA3 116 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 C12orf60Q5U649 245 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 TRABD2AQ86V40 505 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 RIBC1Q8N443 379 aaPredicted RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 ZNF276Q8N554 614 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 TMEM47Q9BQJ4 181 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 BTBD10Q9BSF8 475 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 ASCC2Q9H1I8 757 aaPredicted RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 SYNCQ9H7C4 482 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 ASTN1O14525 1302 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 KLRF2D3W0D1 207 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 PABPC4LP0CB38 370 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 RTP1P59025 263 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 MTA1Q13330 715 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 PTK6Q13882 451 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 TNIP1Q15025 636 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 KYNUQ16719 465 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 KNOP1Q1ED39 458 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 ZNF449Q6P9G9 518 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 MORC4Q8TE76 937 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 SLX1AQ9BQ83 275 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
CD46-207ENST00000367041 CIDEBQ9UHD4 219 aa8.33□□□□□ -1.08
CD46-207ENST00000367041 ZMYM2Q9UBW7 1377 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CAPN9O14815 690 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SORBS3O60504 671 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 DNAJC6O75061 913 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ABHD2P08910 425 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CRABP2P29373 138 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 NOVP48745 357 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SCNN1BP51168 640 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CDR2Q01850 454 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 MECOMQ03112 1051 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 TDRPQ86YL5 185 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SRRM1Q8IYB3 904 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 ANKRD35Q8N283 1001 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 WDR60Q8WVS4 1066 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 GBP5Q96PP8 586 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 TUBGCP5Q96RT8 1024 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 IL1RAPL1Q9NZN1 696 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 G3BP2Q9UN86 482 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 COL24A1Q17RW2 1714 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 NAV1Q8NEY1 1877 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 KDM3AQ9Y4C1 1321 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 E9PMD0 336 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 FSCN2O14926 492 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 EXOC3O60645 756 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CCDC22O60826 627 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ECEL1O95672 775 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 ABCB4P21439 1286 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 GYG1P46976 350 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 KCNJ1P48048 391 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 NEK3P51956 506 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 GRM2Q14416 872 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms