RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 TATDN2Q93075 761 aa12.44□□□□□ -0.42
PRKN-206ENST00000366898 TUBA8Q9NY65 449 aaPredicted RBP12.44□□□□□ -0.42
PRKN-206ENST00000366898 TMCO1Q9UM00 188 aa12.44□□□□□ -0.42
PRKN-206ENST00000366898 PCDHA12Q9UN75 941 aa12.44□□□□□ -0.42
PRKN-206ENST00000366898 TDRKHQ9Y2W6 561 aaKnown RBP12.44□□□□□ -0.42
PRKN-206ENST00000366898 PCDHGC5Q9Y5F6 944 aa12.44□□□□□ -0.42
PRKN-206ENST00000366898 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
PRKN-206ENST00000366898 PDE2AO00408 941 aaPredicted RBP12.43□□□□□ -0.42
PRKN-206ENST00000366898 ATP6V1C1P21283 382 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 AP1B1Q10567 949 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 GEN1Q17RS7 908 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 TTBK2Q6IQ55 1244 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 C4orf33Q8N1A6 199 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 GOLGA8RI6L899 631 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 SOCS7O14512 581 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 KRT38O76015 456 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 ABL1P00519 1130 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 INHBAP08476 426 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
PRKN-206ENST00000366898 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
PRKN-206ENST00000366898 CASC4Q6P4E1 433 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 MRPL1Q9BYD6 325 aaKnown RBP12.43□□□□□ -0.42
PRKN-206ENST00000366898 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 DSEQ9UL01 958 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PCDHA6Q9UN73 950 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PCDHA8Q9Y5H6 950 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 CFBP00751 764 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 SHBGP04278 402 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PYGMP11217 842 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 YWHAGP61981 247 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 OVGP1Q12889 678 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 SFR1Q86XK3 245 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 NRBF2Q96F24 287 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 TRAPPC9Q96Q05 1148 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 LZTS2Q9BRK4 669 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 EPS15L1Q9UBC2 864 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 KIAA1024Q9UPX6 916 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 PCDHA1Q9Y5I3 950 aa12.43□□□□□ -0.42
PRKN-206ENST00000366898 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 SERPING1P05155 500 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 AKR1B1P15121 316 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 ZNF18P17022 549 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 LMNB1P20700 586 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 PLEKHA7Q6IQ23 1121 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 MYOCDQ8IZQ8 938 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 LENG1Q96BZ8 264 aaPredicted RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 CAPN11Q9UMQ6 739 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 CBX6O95503 412 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 COPB2P35606 906 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 PAPD7Q5XG87 772 aaKnown RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 MTHFD1LQ6UB35 978 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 TRPV6Q9H1D0 765 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 ITGB1BP2Q9UKP3 347 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 STRIP2Q9ULQ0 834 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 CCNE1P24864 410 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 HIC1Q14526 733 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 BSPRYQ5W0U4 402 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 LRRC74BQ6ZQY2 392 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 EXOC8Q8IYI6 725 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 SLC25A41Q8N5S1 370 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 SPATA7Q9P0W8 599 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 ZNF232Q9UNY5 417 aa12.42□□□□□ -0.42
PRKN-206ENST00000366898 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.42□□□□□ -0.42
PRKN-206ENST00000366898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 AP3B1O00203 1094 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 ESRRBO95718 433 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 RASA1P20936 1047 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
PRKN-206ENST00000366898 GRM4Q14833 912 aa12.41□□□□□ -0.42
PRKN-206ENST00000366898 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms