RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 FBXL5Q9UKA1 691 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 ILF2Q12905 390 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 TEX13BQ9BXU2 312 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 GTF2H1P32780 548 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 BIRC2Q13490 618 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 H3BRJ5 948 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 NMT2O60551 498 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 GYPCP04921 128 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 NCF2P19878 526 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 IFNA8P32881 189 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 FASTKD5Q7L8L6 764 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 GCNAQ96QF7 691 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 KRT14P02533 472 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 NPEPPSP55786 919 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 SYNJ2BP-COX16A0A087WUM0 186 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 ASB14A6NK59 587 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 COX16Q9P0S2 106 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 FAM47DPA6NHR8 397 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 APOL1O14791 398 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 PPP6R3Q5H9R7 873 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 KIAA1841Q6NSI8 718 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 ANKEF1Q9NU02 776 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 HPCAL4Q9UM19 191 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 RXRBP28702 533 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 DNAL1Q4LDG9 190 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 DYDC2Q96IM9 177 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 TMEM8AQ9HCN3 771 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 CCNI2Q6ZMN8 369 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZC3H18Q86VM9 953 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 BTBD6Q96KE9 485 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 C11orf70Q9BRQ4 267 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 LTN1O94822 1766 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 SPEF2Q9C093 1822 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 PFDN1O60925 122 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 DNAJC17Q9NVM6 304 aaKnown RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZC3H11AO75152 810 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■□□□ 14.4
CDC42BPA-203ENST00000366766 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 HSPH1Q92598 858 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 SLC16A4O15374 487 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 ABL1P00519 1130 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 TMEM253P0C7T8 217 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 VSNL1P62760 191 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 SH3TC2Q8TF17 1288 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 HDAC6Q9UBN7 1215 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 LRFN2Q9ULH4 789 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 TRIP13Q15645 432 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 IZUMO3Q5VZ72 239 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 FBXO33Q7Z6M2 555 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 GRAMD1BQ3KR37 738 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
CDC42BPA-203ENST00000366766 USP27XA6NNY8 438 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 TDP2O95551 362 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARFIP2P53365 341 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 NUDCD3Q8IVD9 361 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ISCUQ9H1K1 167 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 PDHBP11177 359 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 FCER1AP12319 257 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 SGSM1Q2NKQ1 1148 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 C1orf146Q5VVC0 180 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 FAM107AO95990 144 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 PSTPIP1O43586 416 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 TSPAN17Q96FV3 270 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 MYH3P11055 1940 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 HSD17B4P51659 736 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 TBC1D1Q86TI0 1168 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 SLC44A5Q8NCS7 719 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ETNK1Q9HBU6 452 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZFATQ9P243 1243 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms