RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PQLC1Q8N2U9 271 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 SLC35B2Q8TB61 432 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 HAS1Q92839 578 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 SLC2A13Q96QE2 648 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 TRIM8Q9BZR9 551 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 DNM3Q9UQ16 869 aa5.56□□□□□ -1.52
RNU6-553P-201ENST00000364047 AHRRA9YTQ3 701 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 LEFTY2O00292 366 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 CDK11BP21127 795 aaKnown RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 AGXTP21549 392 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 MGAT1P26572 445 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 SREBF1P36956 1147 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 IARSP41252 1262 aaKnown RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 CDKN1CP49918 316 aaPredicted RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 NHLH2Q02577 135 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 FAM47AQ5JRC9 791 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 PGM2L1Q6PCE3 622 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 ZNF572Q7Z3I7 529 aaPredicted RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 SYT12Q8IV01 421 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 LARP4BQ92615 738 aaKnown RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 SENP6Q9GZR1 1112 aaPredicted RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 ZNF768Q9H5H4 540 aaKnown RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 LDAHQ9H6V9 325 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 ZNF277Q9NRM2 450 aaPredicted RBP5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 LANCL2Q9NS86 450 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 TRPM5Q9NZQ8 1165 aa5.55□□□□□ -1.52
RNU6-553P-201ENST00000364047 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 CXorf49A8MYA2 514 aaPredicted RBP5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 PJA2O43164 708 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 ENDOD1O94919 500 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 MT-CO1P00395 513 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 SNRPA1P09661 255 aaKnown RBP5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 ALOX15P16050 662 aaPredicted RBP5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 NR4A1P22736 598 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 GUCY2FP51841 1108 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 CLRN1P58418 232 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 RNASE9P60153 205 aaKnown RBP5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 MGAT2Q10469 447 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 SP140Q13342 867 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 GDF7Q7Z4P5 450 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 CBARPQ8N350 705 aaPredicted RBP5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 PPM1NQ8N819 430 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 LENG9Q96B70 501 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 SLC46A2Q9BY10 475 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 MKS1Q9NXB0 559 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 MOCS1Q9NZB8 636 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 TRHDEQ9UKU6 1024 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 ATRNL1Q5VV63 1379 aa5.54□□□□□ -1.52
RNU6-553P-201ENST00000364047 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 WNT10BO00744 389 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 RAP2AP10114 183 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 RBP3P10745 1247 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 IL2RBP14784 551 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 RAP2BP61225 183 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 TGFB2P61812 414 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 FAM189BP81408 668 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 AMPD3Q01432 767 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 ITKQ08881 620 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 FAM50AQ14320 339 aaKnown RBP5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 SEPT2Q15019 361 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 ACAP2Q15057 778 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 ABCB5Q2M3G0 1257 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 INAVAQ3KP66 663 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 RRP12Q5JTH9 1297 aaKnown RBP5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 ATXN7L2Q5T6C5 722 aaPredicted RBP5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 SYDE2Q5VT97 1194 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 AFMIDQ63HM1 303 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 MRGPREQ86SM8 312 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 AMER2Q8N7J2 671 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 PRPF38AQ8NAV1 312 aaKnown RBP5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 STON2Q8WXE9 905 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 SSH1Q8WYL5 1049 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 PHACTR3Q96KR7 559 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 FZD1Q9UP38 647 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 CHST2Q9Y4C5 530 aa5.53□□□□□ -1.52
RNU6-553P-201ENST00000364047 DIRC3C9JPN6 131 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 RNASET2O00584 256 aaKnown RBP5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ABHD16AO95870 558 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ITGB1P05556 798 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 MYBL2P10244 700 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZSCAN20P17040 1043 aaPredicted RBP5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 LAG3P18627 525 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 GUCY1A2P33402 732 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ALDH1A3P47895 512 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 CHN2P52757 468 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 MTMR1Q13613 665 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 TIGD2Q4W5G0 525 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 KCNV1Q6PIU1 500 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 LRRC55Q6ZSA7 311 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 RHOUQ7L0Q8 258 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZNF627Q7L945 461 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 PROKR1Q8TCW9 393 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms