RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MARK3P27448 753 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 NMT1P30419 496 aaKnown RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 SCFD1Q8WVM8 642 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 CKAP2Q8WWK9 683 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 MYH7P12883 1935 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 FOXN2P32314 431 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 RFC4P35249 363 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 ADGRF4Q8IZF3 695 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 MKNK1Q9BUB5 465 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 LRRC4BQ9NT99 713 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 AIPL1Q9NZN9 384 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-201ENST00000361716 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
VAMP1-201ENST00000361716 CHKAP35790 457 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 THOC5Q13769 683 aaKnown RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 ASRGL1Q7L266 308 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 RUNDC3BQ96NL0 473 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 ALG6Q9Y672 507 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 O00370 1275 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 ZBTB39O15060 712 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CETN2P41208 172 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 TTC27Q6P3X3 843 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CPNE8Q86YQ8 564 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 HIC2Q96JB3 615 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 DNAJC1Q96KC8 554 aaKnown RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 LRCH1Q9Y2L9 728 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 FAM187AA6NFU0 413 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 GOLGA8RI6L899 631 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CFBP00751 764 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 HNRNPCP07910 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 PON1P27169 355 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 USP46P62068 366 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 DOK7Q18PE1 504 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 IRGCQ6NXR0 463 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 GSTA5Q7RTV2 222 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CROCCP2Q86T23 111 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 SLC25A41Q8N5S1 370 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 SYN2Q92777 582 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 DNAAF2Q9NVR5 837 aaKnown RBP13.54□□□□□ -0.24
VAMP1-201ENST00000361716 DNAJC12Q9UKB3 198 aa13.54□□□□□ -0.24
VAMP1-201ENST00000361716 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 AKAP3O75969 853 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 GJB6O95452 261 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-201ENST00000361716 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-201ENST00000361716 FOXB2Q5VYV0 432 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 TRIM59Q8IWR1 403 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 GANQ9H2C0 597 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
VAMP1-201ENST00000361716 WASF2Q9Y6W5 498 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 TJP1Q07157 1748 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 PHF2O75151 1096 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 MED24O75448 989 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 FAM200BP0CF97 657 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 RARGP13631 454 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 NEK3P51956 506 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 KRT17Q04695 432 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
VAMP1-201ENST00000361716 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 C10orf76Q5T2E6 689 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 LRRC74BQ6ZQY2 392 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 FAM186BQ8IYM0 893 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 PRELID2Q8N945 189 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 KLF6Q99612 283 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-201ENST00000361716 REEP2Q9BRK0 252 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 SLIT2O94813 1529 aa13.53□□□□□ -0.24
VAMP1-201ENST00000361716 NR3C1P04150 777 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 ACADSP16219 412 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 RPL13P26373 211 aaKnown RBP13.52□□□□□ -0.24
VAMP1-201ENST00000361716 SERPINB3P29508 390 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 PPP2R5CQ13362 524 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 P3H1Q32P28 736 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 CEP70Q8NHQ1 597 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 ERMNQ8TAM6 284 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.24
VAMP1-201ENST00000361716 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms