RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 FAM49AQ9H0Q0 323 aaPredicted RBP22.76■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CCDC85CA6NKD9 419 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TREHO43280 583 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 GPR32O75388 356 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 RFX1P22670 979 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 MTF1Q14872 753 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TMEM132AQ24JP5 1023 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 FBXO46Q6PJ61 603 aaPredicted RBP22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TOGARAM2Q6ZUX3 1019 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NYAP1Q6ZVC0 841 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZBTB33Q86T24 672 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NME8Q8N427 588 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PPP1R13LQ8WUF5 828 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 FNBP1Q96RU3 617 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 GCOM2Q9BZD3 368 aaPredicted RBP22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 COQ4Q9Y3A0 265 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 FHOD1Q9Y613 1164 aa22.75■■□□□ 1.23
MAP1LC3A-201ENST00000360668 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 DLATP10515 647 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 HARSP12081 509 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PCBP1Q15365 356 aaKnown RBP eCLIP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZNF568Q3ZCX4 644 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZBTB41Q5SVQ8 909 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SFMBT2Q5VUG0 894 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CCSAPQ6IQ19 270 aaPredicted RBP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 BRSK2Q8IWQ3 736 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CCDC170Q8IYT3 715 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PCSK9Q8NBP7 692 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 POP1Q99575 1024 aaKnown RBP22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PPP2R2CQ9Y2T4 447 aa22.74■■□□□ 1.23
MAP1LC3A-201ENST00000360668 GOLGA6L9A6NEM1 432 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ZNF200P98182 395 aaPredicted RBP22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PTPN14Q15678 1187 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 KIZQ2M2Z5 673 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NBPF20Q3BBV1 942 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PPP1R13BQ96KQ4 1090 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TRMT1Q9NXH9 659 aaKnown RBP22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 AIPL1Q9NZN9 384 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 APEX2Q9UBZ4 518 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 GTF2IRD1Q9UHL9 959 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 HTTP42858 3142 aa22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TRIP12Q14669 1992 aaPredicted RBP22.73■■□□□ 1.23
MAP1LC3A-201ENST00000360668 INHAP05111 366 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ASGR1P07306 291 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 MCF2P10911 925 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 KCNA10Q16322 511 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 EEF1DP3Q658K8 133 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 IQCEQ6IPM2 695 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TAF2Q6P1X5 1199 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 DNAJB3Q8WWF6 145 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SPAG5Q96R06 1193 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CGRRF1Q99675 332 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CDT1Q9H211 546 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NHEJ1Q9H9Q4 299 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TOPORSQ9NS56 1045 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CPSF3Q9UKF6 684 aaKnown RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ADGRG1Q9Y653 693 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 EPN1Q9Y6I3 576 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TSPAN1O60635 241 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CSDE1O75534 798 aaKnown RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ERLIN2O94905 339 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CCDC175P0C221 793 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 TNNT1P13805 278 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CYLC1P35663 651 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 JAM2P57087 298 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SURF1Q15526 300 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 C15orf39Q6ZRI6 1047 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SV2AQ7L0J3 742 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 RNF180Q86T96 592 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 SESTD1Q86VW0 696 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 VTI1AQ96AJ9 217 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PDZD7Q9H5P4 517 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PDE11AQ9HCR9 933 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 PAXBP1Q9Y5B6 917 aa22.72■■□□□ 1.23
MAP1LC3A-201ENST00000360668 NDUFA10O95299 355 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 DARSP14868 501 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 ARF4P18085 180 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 GRK4P32298 578 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 POU5F1Q01860 360 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 RAPGEF1Q13905 1077 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 REXO1L1PQ8IX06 675 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 FBXL13Q8NEE6 735 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 STK33Q9BYT3 514 aa22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 R3HCC1Q9Y3T6 440 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-201ENST00000360668 CABYRO75952 493 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SERPING1P05155 500 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TNNI1P19237 187 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TNFSF9P41273 254 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 AP3M2P53677 418 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 WNT7BP56706 349 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TMEM62Q0P6H9 643 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ASIC2Q16515 512 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 KYAT1Q16773 422 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SLC9C1Q4G0N8 1177 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SEZ6Q53EL9 994 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 GJB7Q6PEY0 223 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FMNL3Q8IVF7 1028 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ZNF516Q92618 1163 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 DESI2Q9BSY9 194 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ARHGAP20Q9P2F6 1191 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms