RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 FAM47DPA6NHR8 397 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 KLHL2O95198 593 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 RAD51Q06609 339 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 OR6P1Q8NGX9 317 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 MARK3P27448 753 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 TNFAIP2Q03169 654 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 C6orf10Q5SRN2 563 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 RFX8Q6ZV50 586 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 AGR3Q8TD06 166 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 ASAP3Q8TDY4 903 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC59Q96AG4 307 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 QKIQ96PU8 341 aaKnown RBP eCLIP9.79□□□□□ -0.845e-9■■■□□ 17.4
VPS13A-203ENST00000360280 RBBP8Q99708 897 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PIGUQ9H490 435 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 DMAP1Q9NPF5 467 aaPredicted RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PSMC3IPQ9P2W1 217 aaPredicted RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SNX24Q9Y343 169 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 DNALI1O14645 258 aaPredicted RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SDC4P31431 198 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC74AQ0VAA2 488 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SEMA3FQ13275 785 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 EFL1Q7Z2Z2 1120 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 RNF135Q8IUD6 432 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 MDH1P40925 334 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SERPINH1P50454 418 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 ANKRD65E5RJM6 399 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PLA2G4BP0C869 781 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 C6orf203Q9P0P8 240 aaPredicted RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PDZK1P1A8MUH7 402 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 VHLP40337 213 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 CNPY3Q9BT09 278 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 MOSPD1Q9UJG1 213 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SFR1Q86XK3 245 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 GLMNQ92990 594 aa9.79□□□□□ -0.84
VPS13A-203ENST00000360280 MTO1Q9Y2Z2 717 aaKnown RBP9.79□□□□□ -0.84
VPS13A-203ENST00000360280 SYTL3Q4VX76 610 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 MTHFD1LQ6UB35 978 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 EIF3HO15372 352 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■□ 24.5
VPS13A-203ENST00000360280 CENPXA8MT69 81 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 H2AFYO75367 372 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 FBLN1P23142 703 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 IKBIPQ70UQ0 350 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 LONP2Q86WA8 852 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 RIBC1Q8N443 379 aaPredicted RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 NEURL1BA8MQ27 555 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 DTNBO60941 627 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 INAQ16352 499 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 CYFIP2Q96F07 1278 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 PARVAQ9NVD7 372 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC53A6NM62 1247 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC41Q15345 812 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 TRPM8Q7Z2W7 1104 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ZNF507Q8TCN5 953 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ARSEP51690 589 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 C1DQ13901 141 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 PKN2Q16513 984 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 SHROOM1Q2M3G4 852 aaPredicted RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ARMC3Q5W041 872 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 RHPN2Q8IUC4 686 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 GALNT4Q8N4A0 578 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 CNDP1Q96KN2 507 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ERAP1Q9NZ08 941 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 COG2Q14746 738 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ENOSF1Q7L5Y1 443 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 CARD9Q9H257 536 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 THTPAQ9BU02 230 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 MYL2P10916 166 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 IP6K1Q92551 441 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 SPRTNQ9H040 489 aaPredicted RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 KLHL20Q9Y2M5 609 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ENO3P13929 434 aaPredicted RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 OSTNP61366 133 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 TSPY1Q01534 308 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 PRKCQQ04759 706 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 ZC3H7BQ9UGR2 993 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 STX7O15400 261 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 TEX28O15482 410 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 PPP1R37O75864 691 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 KLHL18O94889 574 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 GNA15P30679 374 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 RPRD1BQ9NQG5 326 aaKnown RBP9.78□□□□□ -0.84
VPS13A-203ENST00000360280 DYRK4Q9NR20 520 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 CLDN3O15551 220 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 HSPBP1Q9NZL4 362 aa9.78□□□□□ -0.84
VPS13A-203ENST00000360280 SHANK2Q9UPX8 1470 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms