RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZBED6P86452 979 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 CYP24A1Q07973 514 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 EXOC3L4Q17RC7 722 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 KIAA0319LQ8IZA0 1049 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 CCDC155Q8N6L0 562 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 OR8K1Q8NGG5 319 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 KIAA1524Q8TCG1 905 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 ZNF668Q96K58 619 aaPredicted RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 GLT1D1Q96MS3 346 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 ACO2Q99798 780 aaKnown RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 FDXACB1Q9BRP7 624 aaPredicted RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 FAM213AQ9BRX8 229 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 FAM49AQ9H0Q0 323 aaPredicted RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 TMX1Q9H3N1 280 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 IFT122Q9HBG6 1241 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 FAM207AQ9NSI2 230 aaPredicted RBP15.04■□□□□ -0
PDLIM5-203ENST00000359265 GCNT4Q9P109 453 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 CEP72Q9P209 647 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 HDAC6Q9UBN7 1215 aa15.04■□□□□ -0
PDLIM5-203ENST00000359265 CNTNAP2Q9UHC6 1331 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 DNM1LO00429 736 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 CLDN3O15551 220 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ARHGAP6O43182 974 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 RPLP2P05387 115 aaKnown RBP15.03■□□□□ -0
PDLIM5-203ENST00000359265 FECHP22830 423 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 HOXC8P31273 242 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ACLYP53396 1101 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 NLRP11P59045 1033 aaKnown RBP15.03■□□□□ -0
PDLIM5-203ENST00000359265 MCCD1P59942 119 aaPredicted RBP15.03■□□□□ -0
PDLIM5-203ENST00000359265 PTPN11Q06124 597 aaPredicted RBP15.03■□□□□ -0
PDLIM5-203ENST00000359265 CETN1Q12798 172 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 NOLC1Q14978 699 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM5-203ENST00000359265 NBPF20Q3BBV1 942 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ZNF568Q3ZCX4 644 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ATF7IP2Q5U623 682 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 MPZL3Q6UWV2 235 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 TSHZ1Q6ZSZ6 1077 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 CACNA2D4Q7Z3S7 1137 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 SESTD1Q86VW0 696 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 TMEM139Q8IV31 216 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ZNF710Q8N1W2 664 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ZSWIM2Q8NEG5 633 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 PPP1R16BQ96T49 567 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 CRACR2AQ9BSW2 395 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 SEZ6LQ9BYH1 1024 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 PLCB1Q9NQ66 1216 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 GTF2IRD1Q9UHL9 959 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 TNFSF13BQ9Y275 285 aa15.03■□□□□ -0
PDLIM5-203ENST00000359265 ERLIN2O94905 339 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 HARSP12081 509 aaKnown RBP15.02■□□□□ -0
PDLIM5-203ENST00000359265 GTF2H1P32780 548 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 MXI1P50539 228 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 PSMD6Q15008 389 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 TAF2Q6P1X5 1199 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 PPP1R13LQ8WUF5 828 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 ZBTB45Q96K62 511 aaPredicted RBP15.02■□□□□ -0
PDLIM5-203ENST00000359265 DNAJC7Q99615 494 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 TCHPQ9BT92 498 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 GCOM2Q9BZD3 368 aaPredicted RBP15.02■□□□□ -0
PDLIM5-203ENST00000359265 NUCKS1Q9H1E3 243 aaKnown RBP15.02■□□□□ -0
PDLIM5-203ENST00000359265 MINDY3Q9H8M7 445 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 AGPAT5Q9NUQ2 364 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 ZNHIT6Q9NWK9 470 aaKnown RBP15.02■□□□□ -0
PDLIM5-203ENST00000359265 PHF24Q9UPV7 400 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 USP20Q9Y2K6 914 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 DAAM1Q9Y4D1 1078 aa15.02■□□□□ -0
PDLIM5-203ENST00000359265 RNF225M0QZC1 329 aaPredicted RBP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 EPHB6O15197 1021 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 OGTO15294 1046 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PMM2O15305 246 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 TREHO43280 583 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 ZNF500O60304 480 aaPredicted RBP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 FOSL2P15408 326 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PROZP22891 400 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PON1P27169 355 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 DLG4P78352 724 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 MCL1Q07820 350 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 ITGA7Q13683 1181 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 HIC1Q14526 733 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PCBP1Q15365 356 aaKnown RBP eCLIP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 LRRC26Q2I0M4 334 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 CBWD6Q4V339 395 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 FAM47CQ5HY64 1035 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 CBWD3Q5JTY5 395 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 CBWD5Q5RIA9 395 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PDXDC1Q6P996 788 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 CYP26C1Q6V0L0 522 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 RUFY4Q6ZNE9 571 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 APBB1IPQ7Z5R6 666 aaPredicted RBP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 ZBTB33Q86T24 672 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 TMTC1Q8IUR5 882 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 NME8Q8N427 588 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PLEKHO2Q8TD55 490 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PARD3BQ8TEW8 1205 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 DNAJB3Q8WWF6 145 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 CCDC127Q96BQ5 260 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms