RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 TRPA1O75762 1119 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 SNCBQ16143 134 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 ESRRAP11474 423 aaPredicted RBP13.74□□□□□ -0.21
NLRC3-202ENST00000359128 CYP2C9P11712 490 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 CDH6P55285 790 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 ESRRGP62508 458 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 SPDYE7PQ495Y7 208 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 FAF1Q9UNN5 650 aaPredicted RBP13.74□□□□□ -0.21
NLRC3-202ENST00000359128 NOVA2Q9UNW9 492 aaKnown RBP13.74□□□□□ -0.21
NLRC3-202ENST00000359128 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 C2CD2LO14523 706 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 SKIP12755 728 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 PRCPP42785 496 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 ALX1Q15699 326 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
NLRC3-202ENST00000359128 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 GSG1L2A8MUP6 293 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 CTIFO43310 598 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 IL18RAPO95256 599 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 GFPT1Q06210 699 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 STILQ15468 1287 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 WDR75Q8IWA0 830 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 FAM151AQ8WW52 585 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 EMC2Q15006 297 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 FAM133BQ5BKY9 247 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 EFCAB12Q6NXP0 572 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 CCNYL1Q8N7R7 359 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 DGAT1O75907 488 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 KITP10721 976 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 KRT80Q6KB66 452 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 STAG2Q8N3U4 1231 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 EML4Q9HC35 981 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 PCDHGB4Q9UN71 923 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 APOBEC2Q9Y235 224 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 RSPH10B2B2RC85 870 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 MFAP3LO75121 409 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 FTLP02792 175 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 RSPH10BP0C881 870 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HSP90AA5PQ58FG0 334 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 PID1Q7Z2X4 250 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 BFARQ9NZS9 450 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 THPOP40225 353 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 SFSWAPQ12872 951 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 PKN3Q6P5Z2 889 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 DDIASQ8IXT1 998 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 NSUN4Q96CB9 384 aaKnown RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
NLRC3-202ENST00000359128 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 ATP9BO43861 1147 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 PDGFRBP09619 1106 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 NR1H3Q13133 447 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 SPARCL1Q14515 664 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
NLRC3-202ENST00000359128 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 WNT8AQ9H1J5 351 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 FAM96AQ9H5X1 160 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 CCDC188H7C350 402 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 H7C4K7 107 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 EFCAB14O75071 495 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 LAMC2Q13753 1193 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 SPATA31E1Q6ZUB1 1445 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 MAPK13O15264 365 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 GPS1Q13098 491 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 DEFB129Q9H1M3 183 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 KDM1AO60341 852 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 RALBP11234 206 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 EFTUD2Q15029 972 aaKnown RBP eCLIP13.72□□□□□ -0.21
NLRC3-202ENST00000359128 WDR72Q3MJ13 1102 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 ZNF746Q6NUN9 644 aaPredicted RBP13.72□□□□□ -0.21
NLRC3-202ENST00000359128 RRM2BQ7LG56 351 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 CHCHD3Q9NX63 227 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms