RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 GPC3P51654 580 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 IL1RL1Q01638 556 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 NUDCD3Q8IVD9 361 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 CYP26B1Q9NR63 512 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 PRR12Q9ULL5 1215 aa14.56□□□□□ -0.08
VCP-201ENST00000358901 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 TMEM253P0C7T8 217 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 DUOXA2Q1HG44 320 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 FAM118BQ9BPY3 351 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 LBHD1Q9BQE6 289 aaPredicted RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 SLC24A3Q9HC58 644 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 ADGRB1O14514 1584 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 OVOS2A0A0G2JMS6 1433 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 PITPNM2Q9BZ72 1349 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 OSBPP22059 807 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 SEC23AQ15436 765 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 SNRNP35Q16560 246 aaKnown RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 TAF1BQ53T94 588 aaPredicted RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 PRR5LQ6MZQ0 368 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 RFX8Q6ZV50 586 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 IL17RAQ96F46 866 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 VPS39Q96JC1 886 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 NYAP2Q9P242 653 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 GRB10Q13322 594 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 MTM1Q13496 603 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 SLC29A2Q14542 456 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 RWDD4Q6NW29 188 aaKnown RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 CDC42EP5Q6NZY7 148 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 METTL23Q86XA0 190 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 THEGQ9P2T0 379 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 IQGAP1P46940 1657 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 H3BQF6 201 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 DIAPH2O60879 1101 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 FAM107AO95990 144 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 ITIH2P19823 946 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 DRP2Q13474 957 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 ARL13BQ3SXY8 428 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 TRMT10CQ7L0Y3 403 aaKnown RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 ILDR1Q86SU0 546 aaPredicted RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 ARL8AQ96BM9 186 aa14.55□□□□□ -0.08
VCP-201ENST00000358901 USP15Q9Y4E8 981 aaPredicted RBP14.55□□□□□ -0.08
VCP-201ENST00000358901 SLC1A1P43005 524 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 TRIM65Q6PJ69 517 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 TRIM67Q6ZTA4 783 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 SYN2Q92777 582 aaPredicted RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 BTBD6Q96KE9 485 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 AP5M1Q9H0R1 490 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 FAM217BQ9NTX9 383 aaPredicted RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 ANGPTL3Q9Y5C1 460 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 CYP11B2P19099 503 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 P3H1Q32P28 736 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 WDR72Q3MJ13 1102 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
VCP-201ENST00000358901 SYCP2LQ5T4T6 812 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 AGBL2Q5U5Z8 902 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 ST13P4Q8IZP2 240 aaPredicted RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 MDM1Q8TC05 714 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 MRPL4Q9BYD3 311 aaKnown RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 CYP4F11Q9HBI6 524 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 SENP1Q9P0U3 644 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 FBXO40Q9UH90 709 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 CPSF3Q9UKF6 684 aaKnown RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 HSD17B3P37058 310 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 ROR1Q01973 937 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 EPC2Q52LR7 807 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 HEATR6Q6AI08 1181 aaKnown RBP14.54□□□□□ -0.08
VCP-201ENST00000358901 C1orf228Q6PIY5 440 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 EXT2Q93063 718 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 NCAPGQ9BPX3 1015 aa14.54□□□□□ -0.08
VCP-201ENST00000358901 CORO7P57737 925 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 PAPD7Q5XG87 772 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 DSTYKQ6XUX3 929 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 CCNYL1Q8N7R7 359 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 RNF139Q8WU17 664 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 CCDC124Q96CT7 223 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 DHX35Q9H5Z1 703 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 SUCLA2Q9P2R7 463 aaPredicted RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 GPR75-ASB3A0A0A6YYF3 556 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 TMEM120BA0PK00 339 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 WDR46O15213 610 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 PHKA2P46019 1235 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 PTGISQ16647 500 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 RSPH3Q86UC2 560 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 OSBPL8Q9BZF1 889 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 UPF3AQ9H1J1 476 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 DDX56Q9NY93 547 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 NRXN1Q9ULB1 1477 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 GNGT2O14610 69 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 CREB3O43889 395 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms