RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SOX10P56693 466 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 IL9RQ01113 521 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 LMNB2Q03252 620 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 KRT81Q14533 505 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SLC29A2Q14542 456 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 MUM1Q2TAK8 710 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 RASIP1Q5U651 963 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 LRRC8CQ8TDW0 803 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 KLHL29Q96CT2 875 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 KLC4Q9NSK0 619 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ZNRF3Q9ULT6 936 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ITIH3Q06033 890 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 TRADDQ15628 312 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 TKFCQ3LXA3 575 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 BBS9Q3SYG4 887 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 FBXO25Q8TCJ0 367 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ATG4CQ96DT6 458 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 CHMP6Q96FZ7 201 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 PCDHGC5Q9Y5F6 944 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 CA4P22748 312 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ACTRT1Q8TDG2 376 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 IDI2Q9BXS1 227 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 TRIM4Q9C037 500 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 GANQ9H2C0 597 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-201ENST00000358894 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-201ENST00000358894 BRAFP15056 766 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 CAP2P40123 477 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ARHGEF18Q6ZSZ5 1173 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 KCNV2Q8TDN2 545 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 C9orf72Q96LT7 481 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 VCXQ9H320 206 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 IVNS1ABPQ9Y6Y0 642 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-201ENST00000358894 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 STXBP2Q15833 593 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 PTGISQ16647 500 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ANKRD20A3Q5VUR7 823 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ACP6Q9NPH0 428 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 RASA4BC9J798 803 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 RASA4O43374 803 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 CHN1P15882 459 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 PHBP35232 272 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 HGSNATQ68CP4 663 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 LRIG3Q6UXM1 1119 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 SCINQ9Y6U3 715 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
COL20A1-201ENST00000358894 ASTN1O14525 1302 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 SKAP2O75563 359 aaPredicted RBP13.05□□□□□ -0.32
COL20A1-201ENST00000358894 MTM1Q13496 603 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 BYSLQ13895 437 aaKnown RBP13.05□□□□□ -0.32
COL20A1-201ENST00000358894 LRRC23Q53EV4 343 aaPredicted RBP13.05□□□□□ -0.32
COL20A1-201ENST00000358894 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF662Q6ZS27 426 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ARHGEF26Q96DR7 871 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ANKRD36BP1Q96IX9 119 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ACTR5Q9H9F9 607 aaPredicted RBP13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 TXNDC9O14530 226 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ICAM1P05362 532 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 FECHP22830 423 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 MAPK7Q13164 816 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 TAF11Q15544 211 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 CDO1Q16878 200 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 SLC47A2Q86VL8 602 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 TAS1R2Q8TE23 839 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 ATG4AQ8WYN0 398 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 KAT5Q92993 513 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 MKL1Q969V6 931 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 WDR18Q9BV38 432 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms