RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 PGM1P36871 562 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 CASP4P49662 377 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 USH1GQ495M9 461 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 TRABDQ9H4I3 376 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PRKAG3Q9UGI9 489 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ANGPTL2Q9UKU9 493 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 TBX10O75333 385 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PSMG1O95456 288 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 TTC4O95801 387 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 NEK3P51956 506 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 P3H1Q32P28 736 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 MFSD5Q6N075 450 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ANKRD2Q9GZV1 360 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ETNK2Q9NVF9 386 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 CLIC5Q9NZA1 410 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 AJAP1Q9UKB5 411 aaPredicted RBP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ZNF335Q9H4Z2 1342 aaPredicted RBP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 LYNP07948 512 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PYGMP11217 842 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 FGFR2P21802 821 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 CYP2J2P51589 502 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 UBE2SQ16763 222 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ACSBG2Q5FVE4 666 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 SLFN11Q7Z7L1 901 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 HIPK4Q8NE63 616 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 MPP4Q96JB8 637 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 SYNCQ9H7C4 482 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
CNOT3-202ENST00000358389 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
CNOT3-202ENST00000358389 FRMPD2Q68DX3 1309 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 A0A0A6YYK5 440 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 EXOC3O60645 756 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 SOX5P35711 763 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 DRG2P55039 364 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 RTP1P59025 263 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 TRIM28Q13263 835 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 DPH6Q7L8W6 267 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 RIBC1Q8N443 379 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 FNBP1Q96RU3 617 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 RIOK1Q9BRS2 568 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 HEMGNQ9BXL5 484 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 HEY2Q9UBP5 337 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 MYH7P12883 1935 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 ARHGAP42A6NI28 874 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 ERVV-2B6SEH9 535 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 APBA3O96018 575 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 PTGIRP43119 386 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 MYBPC3Q14896 1274 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 SLC7A6OSQ96CW6 309 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 CRAMP1Q96RY5 1269 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 DDX25Q9UHL0 483 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 MYH1P12882 1939 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 A6NJR5 290 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 GOLGA8RI6L899 631 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 ZBED4O75132 1171 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 IMPDH2P12268 514 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 ADCY7P51828 1080 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 SFR1Q86XK3 245 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 NME8Q8N427 588 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 PTPRN2Q92932 1015 aa12.17□□□□□ -0.46
CNOT3-202ENST00000358389 DNAJC1Q96KC8 554 aaKnown RBP12.17□□□□□ -0.46
CNOT3-202ENST00000358389 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 MIF4GDA9UHW6 222 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 DDX39AO00148 427 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 NPEPPSP55786 919 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 GRM4Q14833 912 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SDCCAG8Q86SQ7 713 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 MAP7D3Q8IWC1 876 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SLC25A41Q8N5S1 370 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TMEM109Q9BVC6 243 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 CADM1Q9BY67 442 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SAYSD1Q9NPB0 183 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms