RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 SPATA24Q86W54 205 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNF40-202ENST00000357890 RUNDC3BQ96NL0 473 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PIDD1Q9HB75 910 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 ZFP69BQ9UJL9 534 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 CHMP2BQ9UQN3 213 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 FOXO6A8MYZ6 492 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 ENTPD5O75356 428 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 FTLP02792 175 aaPredicted RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 RAB27AP51159 221 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 GIT2Q14161 759 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 KIAA1755Q5JYT7 1200 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 CWF19L1Q69YN2 538 aaKnown RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 PHLDB2Q86SQ0 1253 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 MAB21L3Q8N8X9 362 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 SYT2Q8N9I0 419 aaPredicted RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 PPP1R14CQ8TAE6 165 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 MAGEC3Q8TD91 643 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 EIF2AK1Q9BQI3 630 aaKnown RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 LARSQ9P2J5 1176 aaKnown RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 IKBKGQ9Y6K9 419 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 IRS2Q9Y4H2 1338 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 PLSCR1O15162 318 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 CTNNA2P26232 953 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 EPHB2P29323 1055 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 CACNA2D1P54289 1103 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 ASTE1Q2TB18 679 aaPredicted RBP10.65□□□□□ -0.71
RNF40-202ENST00000357890 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.65□□□□□ -0.718e-8■■□□□ 14.5
RNF40-202ENST00000357890 ACTRT1Q8TDG2 376 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 PABPC3Q9H361 631 aaKnown RBP10.65□□□□□ -0.71
RNF40-202ENST00000357890 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.71
RNF40-202ENST00000357890 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 ATP9AO75110 1047 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 POLR2MP0CAP2 368 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 GCLMP48507 274 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 NSMFQ6X4W1 530 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 HAUS1Q96CS2 278 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 BICD1Q96G01 975 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 SRCAPQ6ZRS2 3230 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 ASAP2O43150 1006 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 SNX3O60493 162 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 EYA4O95677 639 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 GH2P01242 217 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 LACTB2Q53H82 288 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 SH2D4BQ5SQS7 431 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 HYIQ5T013 277 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 JAMLQ86YT9 394 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 MREGQ8N565 214 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CYP2W1Q8TAV3 490 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 HIC2Q96JB3 615 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 SH2D3AQ9BRG2 576 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 RUSC1Q9BVN2 902 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 SUCLA2Q9P2R7 463 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 SH3BP1Q9Y3L3 701 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CAPN9O14815 690 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 RTN2O75298 545 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CBX6O95503 412 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 NDUFB10O96000 172 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 ESRRAP11474 423 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 TNFRSF8P28908 595 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CPA2P48052 419 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 SP4Q02446 784 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 MDH1BQ5I0G3 518 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 ACBD5Q5T8D3 534 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 EPM2AIP1Q7L775 607 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 CENPKQ9BS16 269 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 THAP2Q9H0W7 228 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 KCNMB3Q9NPA1 279 aa10.64□□□□□ -0.71
RNF40-202ENST00000357890 FAF1Q9UNN5 650 aaPredicted RBP10.64□□□□□ -0.71
RNF40-202ENST00000357890 A0A1B0GUL6 1792 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 RBAK-RBAKDNI3L0D1 243 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.716e-9■■□□□ 13.9
RNF40-202ENST00000357890 ANXA13P27216 316 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 SERPINB3P29508 390 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 FMO5P49326 533 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 KYNUQ16719 465 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 IRF2BP2Q7Z5L9 587 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 CERS5Q8N5B7 392 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 TTC8Q8TAM2 541 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 GSDMBQ8TAX9 411 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 RILPQ96NA2 401 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 IKZF4Q9H2S9 585 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 COL4A1P02462 1669 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 GOLGA8IPA6NC78 632 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 GOLGA8JA6NMD2 632 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 IFNB1P01574 187 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 STAT2P52630 851 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms