RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ASAP3Q8TDY4 903 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 C18orf8Q96DM3 657 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 TRAPPC9Q96Q05 1148 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 TSC22D3Q99576 134 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 MYOZ2Q9NPC6 264 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 UBN1Q9NPG3 1134 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 ADAMTSL1Q8N6G6 1762 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 ASTN1O14525 1302 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
CAPN3-205ENST00000357568 PNMA6FA0A0J9YX94 578 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 E9PMD0 336 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 TBX3O15119 743 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.59
CAPN3-205ENST00000357568 GSTA2P09210 222 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 TPBGLP0DKB5 382 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 CTCFP49711 727 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-205ENST00000357568 PEX5P50542 639 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 POLGP54098 1239 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-205ENST00000357568 ANO7Q6IWH7 933 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 IRGCQ6NXR0 463 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.59
CAPN3-205ENST00000357568 ERMNQ8TAM6 284 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.59
CAPN3-205ENST00000357568 OLFML3Q9NRN5 406 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 NKIRAS1Q9NYS0 192 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 ALG6Q9Y672 507 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 USH1CQ9Y6N9 552 aa11.4□□□□□ -0.59
CAPN3-205ENST00000357568 TTC36A6NLP5 189 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 POTECB2RU33 542 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 FGFR4P22455 802 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 HOXD13P35453 343 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 SLC5A9Q2M3M2 681 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 MTHFD1LQ6UB35 978 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 GLYCTKQ8IVS8 523 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 MAIP1Q8WWC4 291 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 UTP4Q969X6 686 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 CCDC28BQ9BUN5 200 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 FOXP3Q9BZS1 431 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 VCXQ9H320 206 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 CDC42EP4Q9H3Q1 356 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 TBC1D7Q9P0N9 293 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 A8MUI8 341 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 ECEL1O95672 775 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 TTC4O95801 387 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 PLCG2P16885 1265 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 TNFAIP3P21580 790 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 STX2P32856 288 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 EPHX2P34913 555 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 CDK8P49336 464 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 IL9RQ01113 521 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 KLC1Q07866 573 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 CGB2Q6NT52 195 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 SESTD1Q86VW0 696 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 ECHDC2Q86YB7 292 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 SLC13A5Q86YT5 568 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 ZNF398Q8TD17 642 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 CD101Q93033 1021 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 DBR1Q9UK59 544 aaKnown RBP11.39□□□□□ -0.59
CAPN3-205ENST00000357568 STK38LQ9Y2H1 464 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
CAPN3-205ENST00000357568 ZNF536O15090 1300 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 MAPK13O15264 365 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 MARCH6O60337 910 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ABHD2P08910 425 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ALDH3A1P30838 453 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 TNNI2P48788 182 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 RPS6KA3P51812 740 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-205ENST00000357568 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ANKLE1Q8NAG6 615 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ZC3H15Q8WU90 426 aaKnown RBP11.38□□□□□ -0.59
CAPN3-205ENST00000357568 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 BICD1Q96G01 975 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 RMDN2Q96LZ7 410 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 PLVAPQ9BX97 442 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 YIPF3Q9GZM5 350 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 GPR88Q9GZN0 384 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 LNPEPQ9UIQ6 1025 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
CAPN3-205ENST00000357568 FOCADQ5VW36 1801 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms