RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MTUS1Q9ULD2 1270 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 FSCN2O14926 492 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 CLIC2O15247 247 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 MUTP22033 750 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 GPC5P78333 572 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 KLC1Q07866 573 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PHLDB3Q6NSJ2 640 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 TEKT4Q8WW24 435 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PSPC1Q8WXF1 523 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 NUDCD1Q96RS6 583 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 LNPEPQ9UIQ6 1025 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 NAALADL1Q9UQQ1 740 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PTPN22Q9Y2R2 807 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 ALDH3A1P30838 453 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZNF543Q08ER8 600 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PTK6Q13882 451 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 CCDC25Q86WR0 208 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 SLC20A1Q8WUM9 679 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 MAML1Q92585 1016 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 RUSC1Q9BVN2 902 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 HAO1Q9UJM8 370 aa12.95□□□□□ -0.34
SMARCAL1-201ENST00000357276 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 FOXN3O00409 490 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 MARCH6O60337 910 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 CDH16O75309 829 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 PABPC4Q13310 644 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 DNAJC9Q8WXX5 260 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 DENND2DQ9H6A0 471 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 NINJ2Q9NZG7 142 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 NEU2Q9Y3R4 380 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 TBX3O15119 743 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SMIM24O75264 130 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 POLD1P28340 1107 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 CAV1Q03135 178 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 INTS8Q75QN2 995 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 LRRC37BQ96QE4 947 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 PLSCR1O15162 318 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 MAPK13O15264 365 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 PCK1P35558 622 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 MXRA7P84157 204 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 KRT17Q04695 432 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SNX1Q13596 522 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 KYNUQ16719 465 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 RNF207Q6ZRF8 634 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 LONP2Q86WA8 852 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 C10orf82Q8WW14 230 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 LENG9Q96B70 501 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 SNF8Q96H20 258 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 DCLRE1BQ9H816 532 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 NKIRAS1Q9NYS0 192 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 C2CD2Q9Y426 696 aa12.94□□□□□ -0.34
SMARCAL1-201ENST00000357276 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 SORBS3O60504 671 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 DCTN3O75935 186 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 LDHCP07864 332 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 IL9RQ01113 521 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 PDCD2Q16342 344 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 IKZF4Q9H2S9 585 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 EIF4E1BA6NMX2 242 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZBTB5O15062 677 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 PRPF4O43172 522 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■■■□ 25.6
SMARCAL1-201ENST00000357276 GCNT3O95395 438 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 GAP43P17677 238 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 EPHB2P29323 1055 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 RHBDL3P58872 404 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 OCRLQ01968 901 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 Q4G0T1 1027 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms