RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 IGF2BP3O00425 579 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 RAD17O75943 681 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 SFNP31947 248 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 COPS2P61201 443 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 IRX1P78414 480 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZBTB17Q13105 803 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 TBX2Q13207 712 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 MAPK6Q16659 721 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 EEPD1Q7L9B9 569 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 ANKMY2Q8IV38 441 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 RAPGEF5Q92565 580 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 TDRD3Q9H7E2 651 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 TBX3O15119 743 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 MYBP10242 640 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 PSMC5P62195 406 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 LRRC34Q8IZ02 419 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 P3H1Q32P28 736 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 NPHS2Q9NP85 383 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 GRM1Q13255 1194 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC30A9Q6PML9 568 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 TRIM67Q6ZTA4 783 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 SIX6OS1Q8N1H7 587 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ALKBH8Q96BT7 664 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 RANBP17Q9H2T7 1088 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 OATP04181 439 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 KDSRQ06136 332 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 RASSF3Q86WH2 238 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 FBXL16Q8N461 479 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ICA1LQ8NDH6 482 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF446Q9NWS9 450 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ARHGAP20Q9P2F6 1191 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 TRIM33Q9UPN9 1127 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 NEU2Q9Y3R4 380 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ARHGAP10A1A4S6 786 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC26A4O43511 780 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 RASA1P20936 1047 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 ERFP50548 548 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 LBHD1Q9BQE6 289 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 TSSK1BQ9BXA7 367 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 KCND1Q9NSA2 647 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 KLHL8Q9P2G9 620 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC4A7Q9Y6M7 1214 aa16.53■□□□□ 0.24
TRAPPC11-202ENST00000357207 NPR1P16066 1061 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 SDC4P31431 198 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 KIF22Q14807 665 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 KLC3Q6P597 504 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 MYLK4Q86YV6 388 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 RPS6KC1Q96S38 1066 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 ORC6Q9Y5N6 252 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 HIC1Q14526 733 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 LCA5Q86VQ0 697 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 BBS5Q8N3I7 341 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 DNAJC9Q8WXX5 260 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 TMBIM4Q9HC24 238 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
TRAPPC11-202ENST00000357207 COPB2P35606 906 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 ROR1Q01973 937 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 MAPK7Q13164 816 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 BIRC2Q13490 618 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 ARMCX2Q7L311 632 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 OSBPL8Q9BZF1 889 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 UBN1Q9NPG3 1134 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 HSPBP1Q9NZL4 362 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 GABBR1Q9UBS5 961 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 CEP152O94986 1710 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 GOLGA8CPA6NN73 597 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 NVLO15381 856 aaKnown RBP16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 SLC27A3Q5K4L6 730 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 CENPPQ6IPU0 288 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.23
TRAPPC11-202ENST00000357207 MARK3P27448 753 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 RPA1P27694 616 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 TYK2P29597 1187 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 EEF1DP29692 281 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 RCOR2Q8IZ40 523 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 CAVIN3Q969G5 261 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 PPCSQ9HAB8 311 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 RBAKQ9NYW8 714 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 PSMC3IPQ9P2W1 217 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 PDHBP11177 359 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 MAGEA4P43358 317 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 SERPINB4P48594 390 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 TAP1Q03518 808 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 AGO2Q9UKV8 859 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 GLI1P08151 1106 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms