RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RAD9AQ99638 391 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 REEP2Q9BRK0 252 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 NKX2-4Q9H2Z4 354 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 MINDY3Q9H8M7 445 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 KMT5AQ9NQR1 393 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 TMEM161AQ9NX61 479 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 LARSQ9P2J5 1176 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 LRFN2Q9ULH4 789 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 YBX2Q9Y2T7 364 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 RBM19Q9Y4C8 960 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 GPSM3Q9Y4H4 160 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 FRMD3A2A2Y4 597 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 K7ENM7 598 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 WFS1O76024 890 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 MAPTP10636 758 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 PFKFB1P16118 471 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 NPTX2P47972 431 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 SMTNP53814 917 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 PEX3P56589 373 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 AMPD3Q01432 767 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 NCBP1Q09161 790 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 ALCAMQ13740 583 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 GIT2Q14161 759 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 DCAF4L1Q3SXM0 396 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 TMEM259Q4ZIN3 620 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 RTN4RL1Q86UN2 441 aaPredicted RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 HACE1Q8IYU2 909 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 TMEM87AQ8NBN3 555 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 DHX58Q96C10 678 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 YME1L1Q96TA2 773 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 FZD8Q9H461 694 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 PARVGQ9HBI0 331 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 FAM105AQ9NUU6 356 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 RNF19AQ9NV58 838 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 KBTBD4Q9NVX7 518 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 HPSEQ9Y251 543 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 INSL6Q9Y581 213 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 PCDHB7Q9Y5E2 793 aa4.37□□□□□ -1.71
CNOT4-202ENST00000356162 PDCD11Q14690 1871 aaKnown RBP4.37□□□□□ -1.71
CNOT4-202ENST00000356162 UBE4BO95155 1302 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 NPHP3-ACAD11A0A0J9YXS1 232 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 A0A0U1RQF3 1178 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CARNS1A5YM72 827 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MYMKA6NI61 221 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CCDC169A6NNP5 214 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 GRXCR1A8MXD5 290 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ACKR2O00590 384 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ZNF623O75123 536 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 DGKIO75912 1065 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 EOMESO95936 686 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ATF7P17544 494 aaPredicted RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ARF4P18085 180 aaPredicted RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 RABGGTBP53611 331 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 DHX8Q14562 1220 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 UBXN11Q5T124 520 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 SLC27A1Q6PCB7 646 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MRPL10Q7Z7H8 261 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 SFR1Q86XK3 245 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CCDC65Q8IXS2 484 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CEP57L1Q8IYX8 460 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PDILTQ8N807 584 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 FSIP1Q8NA03 581 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 TMEM161BQ8NDZ6 487 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ZNF689Q96CS4 500 aaPredicted RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 DNAJC19Q96DA6 116 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PGBD4Q96DM1 585 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CHAMP1Q96JM3 812 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 IPO9Q96P70 1041 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 C7orf25Q9BPX7 421 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ADPGKQ9BRR6 497 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 KIFC3Q9BVG8 833 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MRPL9Q9BYD2 267 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MRPL4Q9BYD3 311 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 TMEM117Q9H0C3 514 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ST6GALNAC4Q9H4F1 302 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PDZD7Q9H5P4 517 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 KCNH3Q9ULD8 1083 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 TDRD15B5MCY1 1934 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ATG2AQ2TAZ0 1938 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MKI67P46013 3256 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 LINC01553A4QN01 128 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 TERTO14746 1132 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 INPPL1O15357 1258 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 SLC16A4O15374 487 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 POLR2DO15514 142 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CSDE1O75534 798 aaKnown RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 NPTXRO95502 500 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PIGRP01833 764 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 MYL1P05976 194 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 CA3P07451 260 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 SLFN14P0C7P3 912 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 HOXA11P31270 313 aaPredicted RBP4.36□□□□□ -1.71
CNOT4-202ENST00000356162 SYKP43405 635 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ERVK-21P61565 698 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 ASIC1P78348 528 aa4.36□□□□□ -1.71
CNOT4-202ENST00000356162 PTK2Q05397 1052 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms