RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 PHF2O75151 1096 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 MT-ND3P03897 115 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 FMO5P49326 533 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 LXNQ9BS40 222 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 KIF9Q9HAQ2 790 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 SPARCL1Q14515 664 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 TRIM59Q8IWR1 403 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 MDM1Q8TC05 714 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 SNF8Q96H20 258 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
COLCA1-201ENST00000355430 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 FMN2Q9NZ56 1722 aa13.11□□□□□ -0.31
COLCA1-201ENST00000355430 TCP11X1B4DZS4 312 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SMIM24O75264 130 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 GGPS1O95749 300 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 STAT5BP51692 787 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 KYAT1Q16773 422 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 BBS9Q3SYG4 887 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PPP4R1Q8TF05 950 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SEL1LQ9UBV2 794 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 APEX2Q9UBZ4 518 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 TTC7AQ9ULT0 858 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 H0Y3Z8 333 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 ZC2HC1CQ53FD0 456 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CENPUQ71F23 418 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SLC40A1Q9NP59 571 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PIK3C2AO00443 1686 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CLDN3O15551 220 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CYP26A1O43174 497 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CIITAP33076 1130 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 LONRF1Q17RB8 773 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PDCD7Q8N8D1 485 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CXCL11O14625 94 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 OPHN1O60890 802 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 AGTP01019 485 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 DDR1Q08345 913 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 ZNF568Q3ZCX4 644 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 ADAM22Q9P0K1 906 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SPAG7O75391 227 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PPP4CP60510 307 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 DGKDQ16760 1214 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 PYROXD1Q8WU10 500 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 CAVIN3Q969G5 261 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 FAM149B1Q96BN6 582 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
COLCA1-201ENST00000355430 SUCLA2Q9P2R7 463 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-201ENST00000355430 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 ZWILCHQ9H900 591 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
COLCA1-201ENST00000355430 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 CFAP73A6NFT4 308 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 RTN2O75298 545 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 DCTN3O75935 186 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 CAV1Q03135 178 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 CFAP36Q96G28 342 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 TMBIM4Q9HC24 238 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
COLCA1-201ENST00000355430 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
COLCA1-201ENST00000355430 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
COLCA1-201ENST00000355430 BACE1P56817 501 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 SEPT1Q8WYJ6 367 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
COLCA1-201ENST00000355430 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 MCF2LO15068 1137 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 SCARA5Q6ZMJ2 495 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 MORC4Q8TE76 937 aa13.09□□□□□ -0.31
COLCA1-201ENST00000355430 A0A0G2JND7 137 aa13.08□□□□□ -0.31
COLCA1-201ENST00000355430 A6NJR5 290 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms