RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 MOV10L1Q9BXT6 1211 aaKnown RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 EYA4O95677 639 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FGGP02679 453 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 EAPPQ56P03 285 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 ZNF746Q6NUN9 644 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 DPY19L2P1Q6NXN4 242 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 EPM2AIP1Q7L775 607 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 VSIG1Q86XK7 387 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 KIFAP3Q92845 792 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 ELMO3Q96BJ8 720 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FAM129AQ9BZQ8 928 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 NSRP1Q9H0G5 558 aaKnown RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 METTL14Q9HCE5 456 aaKnown RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FBXO28Q9NVF7 368 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 TAS2R14Q9NYV8 317 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 WDR35Q9P2L0 1181 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 CHMP2BQ9UQN3 213 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 IGSF9BQ9UPX0 1349 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 EXOC3O60645 756 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 SLITRK3O94933 977 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FOSP01100 380 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 RARAP10276 462 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 KCNA3P22001 575 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 FUT4P22083 530 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 CHRNA5P30532 468 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 PSMC2P35998 433 aaKnown RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 IFI35P80217 286 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 MTHFD1LQ6UB35 978 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 RFX8Q6ZV50 586 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 LNX1Q8TBB1 728 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 MKL1Q969V6 931 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 NDNQ99608 321 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 SCOCQ9UIL1 159 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 SLC12A4Q9UP95 1085 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 MYO3BQ8WXR4 1341 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 TCP11X1B4DZS4 312 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 H0YIN7 160 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 RGS16O15492 202 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 CA8P35219 290 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 MRPS35P82673 323 aaKnown RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 Q4G0T1 1027 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 AADACL2Q6P093 401 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 LRRC57Q8N9N7 239 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 SLC35G2Q8TBE7 412 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 DTX3LQ8TDB6 740 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 CRYGNQ8WXF5 182 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 MBOAT7Q96N66 472 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMG6-202ENST00000354901 PARVGQ9HBI0 331 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
SMG6-202ENST00000354901 WRAP73Q9P2S5 460 aaPredicted RBP10.03□□□□□ -0.8
SMG6-202ENST00000354901 FOXO6A8MYZ6 492 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 SMAPO00193 183 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 HNRNPRO43390 633 aaKnown RBP10.02□□□□□ -0.8
SMG6-202ENST00000354901 ARP10275 920 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 FMO5P49326 533 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 STAT2P52630 851 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 TMED1Q13445 227 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 BIRC3Q13489 604 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 ZNF268Q14587 947 aaPredicted RBP10.02□□□□□ -0.8
SMG6-202ENST00000354901 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.8
SMG6-202ENST00000354901 P3H1Q32P28 736 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 FOXR2Q6PJQ5 311 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 DNAJC14Q6Y2X3 702 aaPredicted RBP10.02□□□□□ -0.8
SMG6-202ENST00000354901 FBXO41Q8TF61 875 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 DNAJC9Q8WXX5 260 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 P3H4Q92791 437 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 ARHGEF26Q96DR7 871 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.8
SMG6-202ENST00000354901 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.02□□□□□ -0.88e-7■■■■■ 32.7
SMG6-202ENST00000354901 MRIQ9BWK5 157 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.8
SMG6-202ENST00000354901 TNFAIP3P21580 790 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.81
SMG6-202ENST00000354901 COPS2P61201 443 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 DACT2Q5SW24 774 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 ISLR2Q6UXK2 745 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 ARHGAP27Q6ZUM4 889 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 SUPT20HQ8NEM7 779 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 TTC8Q8TAM2 541 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 CTNNBL1Q8WYA6 563 aaPredicted RBP10.02□□□□□ -0.81
SMG6-202ENST00000354901 AMFRQ9UKV5 643 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 FRMD4BQ9Y2L6 1034 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 TMEM150BA6NC51 233 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 TBX3O15119 743 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 SUPT3HO75486 399 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 KRT13P13646 458 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 CCNFP41002 786 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 ZC3H3Q8IXZ2 948 aaKnown RBP10.02□□□□□ -0.81
SMG6-202ENST00000354901 RUBCNQ92622 972 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 GLG1Q92896 1179 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 PBKQ96KB5 322 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms