RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 KRT26Q7Z3Y9 468 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 FAM9CQ8IZT9 166 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 P3H4Q92791 437 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 ARL8AQ96BM9 186 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 TRAPPC9Q96Q05 1148 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 NOC4LQ9BVI4 516 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 PANK4Q9NVE7 773 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 DDX25Q9UHL0 483 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 SRRM3A6NNA2 597 aaPredicted RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 CES2O00748 559 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 ATP2C2O75185 946 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 ENTPD3O75355 529 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 GHRP10912 638 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CCND1P24385 295 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 KIF5AQ12840 1032 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 PDXDC1Q6P996 788 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 RNPC3Q96LT9 517 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 PTPRHQ9HD43 1115 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 COL4A3BPQ9Y5P4 624 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 TLR2O60603 784 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 ALADP13716 330 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 KDM7AQ6ZMT4 941 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 NEK8Q86SG6 692 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 IQCKQ8N0W5 287 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 CCDC89Q8N998 374 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 EIF1ADQ8N9N8 165 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 SH3GL1Q99961 368 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 INIPQ9NRY2 104 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.58□□□□□ -0.563e-6■■□□□ 12.7
SND1-201ENST00000354725 RNF14Q9UBS8 474 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 ZNF112Q9UJU3 913 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 R3HDM2Q9Y2K5 976 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 TRAF5O00463 557 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 AKR1B10O60218 316 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 FLOT1O75955 427 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 SLC4A1P02730 911 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 EPHB4P54760 987 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 NONOQ15233 471 aaKnown RBP eCLIP11.58□□□□□ -0.563e-7■■■■□ 24.5
SND1-201ENST00000354725 TMEM53Q6P2H8 277 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 MTMR8Q96EF0 704 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 DYNLL2Q96FJ2 89 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 FANCFQ9NPI8 374 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 USP40Q9NVE5 1235 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 STIM2Q9P246 746 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 LZTS1Q9Y250 596 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 HYOU1Q9Y4L1 999 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 IGKV6D-41A0A0C4DH26 115 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 USO1O60763 962 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 SP100P23497 879 aaPredicted RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 CACNB3P54284 484 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 OTUD6AQ7L8S5 288 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 SESTD1Q86VW0 696 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 TNIP2Q8NFZ5 429 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 MOV10L1Q9BXT6 1211 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
SND1-201ENST00000354725 RABGAP1Q9Y3P9 1069 aa11.58□□□□□ -0.56
SND1-201ENST00000354725 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
SND1-201ENST00000354725 TROVE2P10155 538 aaKnown RBP eCLIP11.57□□□□□ -0.56
SND1-201ENST00000354725 GABPAQ06546 454 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 SHQ1Q6PI26 577 aaKnown RBP11.57□□□□□ -0.56
SND1-201ENST00000354725 TIMM22Q9Y584 194 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 CLRN2A0PK11 232 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 E7EVH7 732 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 TBC1D12O60347 775 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 FOXD2O60548 495 aaPredicted RBP11.57□□□□□ -0.56
SND1-201ENST00000354725 HNRNPCP07910 306 aaKnown RBP eCLIP11.57□□□□□ -0.563e-6■□□□□ 11.2
SND1-201ENST00000354725 EIF4A3P38919 411 aaKnown RBP11.57□□□□□ -0.56
SND1-201ENST00000354725 TRIM68Q6AZZ1 485 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 TRIM50Q86XT4 487 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 CCDC63Q8NA47 563 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 CDCA5Q96FF9 252 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 CDHR1Q96JP9 859 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 CCDC42Q96M95 316 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms