RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SFR1Q86XK3 245 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 P2RX5Q93086 422 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CHP1Q99653 195 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 STRA6Q9BX79 667 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 EPN3Q9H201 632 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SEMA6BQ9H3T3 888 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 DUSP10Q9Y6W6 482 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 MYH9P35579 1960 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 EVI5O60447 810 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 HIP1RO75146 1068 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SMPD1P17405 629 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 STAT5BP51692 787 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 MXRA7P84157 204 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 TARBP2Q15633 366 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 AGAP11Q8TF27 550 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SCFD1Q8WVM8 642 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 OSBPL1AQ9BXW6 950 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 ARHGAP39Q9C0H5 1083 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PARVGQ9HBI0 331 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CYP26B1Q9NR63 512 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 BICDL2A1A5D9 508 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SLC8A1P32418 973 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PSMC4P43686 418 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 NPEPPSP55786 919 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CCL14Q16627 93 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 PTGISQ16647 500 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 WHAMMP3Q1A5X7 153 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 XKR9Q5GH70 373 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 WDR93Q6P2C0 686 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 SUDS3Q9H7L9 328 aaPredicted RBP10.89□□□□□ -0.67
SYNE1-203ENST00000354674 RHBDL2Q9NX52 303 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 RNF186Q9NXI6 227 aa10.89□□□□□ -0.67
SYNE1-203ENST00000354674 CASP8AP2Q9UKL3 1982 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 PPP1R37O75864 691 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 FUT4P22083 530 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 SLC26A2P50443 739 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 CAP1Q01518 475 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 PDCD2Q16342 344 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ANKRD40Q6AI12 368 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 APTXQ7Z2E3 356 aaKnown RBP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 LONP2Q86WA8 852 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 MYOCDQ8IZQ8 938 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 KIF2BQ8N4N8 673 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 KCTD10Q9H3F6 313 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 GNEQ9Y223 722 aaKnown RBP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ADCY6O43306 1168 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 PPFIA2O75334 1257 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 DGAT1O75907 488 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 FAM13AO94988 1023 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 HOXD13P35453 343 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 CASP5P51878 434 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 RTP1P59025 263 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ELF3P78545 371 aaPredicted RBP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ZC3H3Q8IXZ2 948 aaKnown RBP10.88□□□□□ -0.67
SYNE1-203ENST00000354674 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 HVCN1Q96D96 273 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 ST6GALNAC4Q9H4F1 302 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 C15orf41Q9Y2V0 281 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 SAR1BQ9Y6B6 198 aa10.88□□□□□ -0.67
SYNE1-203ENST00000354674 LRRC10BA6NIK2 292 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
SYNE1-203ENST00000354674 FAM153BP0C7A2 387 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 NR1D1P20393 614 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 CYP2B6P20813 491 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 SP3Q02447 781 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 LRRC63Q05C16 580 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 LRRC41Q15345 812 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 FAM153CQ494X1 144 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 LRRC23Q53EV4 343 aaPredicted RBP10.87□□□□□ -0.67
SYNE1-203ENST00000354674 ANKRD20A8PQ5CZ79 823 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 IRF2BP1Q8IU81 584 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 KCNN1Q92952 543 aa10.87□□□□□ -0.67
SYNE1-203ENST00000354674 VPS16Q9H269 839 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms