RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FAM213AQ9BRX8 229 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 WNT8AQ9H1J5 351 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 GABBR1Q9UBS5 961 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 MTRF1LQ9UGC7 380 aaKnown RBP20.98■□□□□ 0.95
COL13A1-201ENST00000354547 MTUS1Q9ULD2 1270 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 EIF3BP55884 814 aaKnown RBP20.98■□□□□ 0.95
COL13A1-201ENST00000354547 MTMR2Q13614 643 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 SPRED3Q2MJR0 410 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 RNF207Q6ZRF8 634 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 SV2AQ7L0J3 742 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 HELQQ8TDG4 1101 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 RPS6KC1Q96S38 1066 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 RAB20Q9NX57 234 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 ANAPC7Q9UJX3 599 aa20.98■□□□□ 0.95
COL13A1-201ENST00000354547 WDR64B1ANS9 1081 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 CTNNA2P26232 953 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 FBXL13Q8NEE6 735 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 RIPK3Q9Y572 518 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 EGFRP00533 1210 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 GJC1P36383 396 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 NCKAP1LP55160 1127 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 OTUD6AQ7L8S5 288 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 PDCD2LQ9BRP1 358 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 FZD1Q9UP38 647 aa20.97■□□□□ 0.95
COL13A1-201ENST00000354547 ACSL3O95573 720 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 MAPTP10636 758 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 GZMAP12544 262 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 HADHBP55084 474 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 RWDD2BP57060 319 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 CDR2Q01850 454 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 BAATQ14032 418 aaPredicted RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 MMS22LQ6ZRQ5 1243 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 SPATS2Q86XZ4 545 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 C12orf56Q8IXR9 622 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 C4orf19Q8IY42 314 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 EXOC7Q9UPT5 735 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 SLC39A4Q6P5W5 647 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 TLCD1Q96CP7 247 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 HEMGNQ9BXL5 484 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 EFCC1Q9HA90 598 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 SLC38A10Q9HBR0 1119 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 ZNF646O15015 1829 aaPredicted RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 FOXO6A8MYZ6 492 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 PODXLO00592 558 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 MAPK4P31152 587 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 MNAT1P51948 309 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 KCNV1Q6PIU1 500 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 CACNA2D3Q8IZS8 1091 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 CD101Q93033 1021 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 XPO6Q96QU8 1125 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 IWS1Q96ST2 819 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
COL13A1-201ENST00000354547 TMEM8AQ9HCN3 771 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 ASIC3Q9UHC3 531 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 PCYOX1Q9UHG3 505 aa20.96■□□□□ 0.95
COL13A1-201ENST00000354547 ADGRA3Q8IWK6 1321 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 FNTAP49354 379 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 SGO2Q562F6 1265 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 ICE2Q659A1 982 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 SWSAP1Q6NVH7 229 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 CYFIP1Q7L576 1253 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 NLRX1Q86UT6 975 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 PASD1Q8IV76 773 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 MGARPQ8TDB4 240 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 RPAP3Q9H6T3 665 aaPredicted RBP20.95■□□□□ 0.94
COL13A1-201ENST00000354547 PXMP2Q9NR77 195 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 PCDHA3Q9Y5H8 950 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 WDR46O15213 610 aaKnown RBP20.95■□□□□ 0.94
COL13A1-201ENST00000354547 TBC1D12O60347 775 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 SSR1P43307 286 aaKnown RBP20.95■□□□□ 0.94
COL13A1-201ENST00000354547 CDR1P51861 262 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 CCDC13Q8IYE1 715 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 CCDC114Q96M63 670 aa20.95■□□□□ 0.94
COL13A1-201ENST00000354547 CYP1A2P05177 515 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 HSPA6P17066 643 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 CALCOCO2Q13137 446 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 BYSLQ13895 437 aaKnown RBP20.94■□□□□ 0.94
COL13A1-201ENST00000354547 LONRF1Q17RB8 773 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 SPOPLQ6IQ16 392 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 KIFAP3Q92845 792 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 ATG4CQ96DT6 458 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 CHST7Q9NS84 486 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 ZNF862O60290 1169 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 ECEL1O95672 775 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 CXCL9Q07325 125 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 GKAP1Q5VSY0 366 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-201ENST00000354547 MAP4K3Q8IVH8 894 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 NIM1KQ8IY84 436 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 PWWP2AQ96N64 755 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 CEP89Q96ST8 783 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 OSBPL7Q9BZF2 842 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 SEPT9Q9UHD8 586 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-201ENST00000354547 PASKQ96RG2 1323 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 NUDT17P0C025 328 aa20.94■□□□□ 0.94
COL13A1-201ENST00000354547 GTF2A1P52655 376 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-201ENST00000354547 KRT17Q04695 432 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms