RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CARS2Q9HA77 564 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MLXIPQ9HAP2 919 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SLAMF8Q9P0V8 285 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 PCDHB4Q9Y5E5 795 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 NUMBLQ9Y6R0 609 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF469Q96JG9 3925 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PPC4 97 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 KRIT1O00522 736 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MSTNO14793 375 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MAFGO15525 162 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 DHX15O43143 795 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CSTBP04080 98 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 VCAM1P19320 739 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MC3RP41968 323 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CREMQ03060 361 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 DBPQ10586 325 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 PRRT3Q5FWE3 981 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SULT6B1Q6IMI4 303 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TMC5Q6UXY8 1006 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 RSRC2Q7L4I2 434 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CPOQ8IVL8 374 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 BCL6BQ8N143 479 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CLPTM1LQ96KA5 538 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 ZSWIM3Q96MP5 696 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 AGO4Q9HCK5 861 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SLAMF7Q9NQ25 335 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 LMBRD1Q9NUN5 540 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 BLOC1S4Q9NUP1 217 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 NOP53Q9NZM5 478 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 USP36Q9P275 1121 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MAN2B2Q9Y2E5 1009 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 LRRFIP2Q9Y608 721 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 KIF21BO75037 1637 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MRC2Q9UBG0 1479 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 EPB41L2O43491 1005 aaKnown RBP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MGEA5O60502 916 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 GFPT2O94808 682 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 AFMP43652 599 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ALDH9A1P49189 494 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 FNTBP49356 437 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 HK3P52790 923 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MPP1Q00013 466 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 CNGA2Q16280 664 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ARL13BQ3SXY8 428 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MROH9Q5TGP6 573 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 HLA-DQA1Q5Y7H0 255 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ARHGAP27Q6ZUM4 889 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 USP49Q70CQ1 688 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 PROSER1Q86XN7 944 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 PDILTQ8N807 584 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MAML3Q96JK9 1138 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MRGPRX1Q96LB2 322 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 NOL10Q9BSC4 688 aaKnown RBP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 CDC42EP3Q9UKI2 254 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 BAZ1BQ9UIG0 1483 aaKnown RBP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ST20-MTHFSA0A0A6YYL1 179 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 NPC1O15118 1278 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 LRG1P02750 347 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 DHRS4L1P0CG22 281 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 COL6A1P12109 1028 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 FSTP19883 344 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 LIFRP42702 1097 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 GLRBP48167 497 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 SLC16A1P53985 500 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 PRKAA2P54646 552 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 IL13RA1P78552 427 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 SNAPC2Q13487 334 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 EMC4Q5J8M3 183 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 AGAP9Q5VTM2 703 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 CCDC30Q5VVM6 783 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 PPP4R3AQ6IN85 833 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MZT2AQ6P582 158 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 CYP26C1Q6V0L0 522 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 TMC6Q7Z403 805 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 SPRED2Q7Z698 418 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 RIOX2Q8IUF8 465 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 SYTL1Q8IYJ3 562 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ADGRG2Q8IZP9 1017 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ASB11Q8WXH4 323 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 TNPO1Q92973 898 aaKnown RBP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MUL1Q969V5 352 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 RRP36Q96EU6 259 aaKnown RBP1.95□□□□□ -2.1
BRCA1-202ENST00000354071 TMX3Q96JJ7 454 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 MRGPRX4Q96LA9 322 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF287Q9HBT7 754 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 TBC1D23Q9NUY8 699 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 CLIC5Q9NZA1 410 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 STOML1Q9UBI4 398 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 OGDHLQ9ULD0 1010 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 DENND2AQ9ULE3 1009 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 SLC45A1Q9Y2W3 748 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 PCDHB6Q9Y5E3 794 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 ADAMTS20P59510 1910 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 KRTAP4-8A0A0G2JLE6 195 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PPL8 197 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 DTNBO60941 627 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 TBX18O95935 607 aa1.95□□□□□ -2.1
BRCA1-202ENST00000354071 IL18BPO95998 194 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms