RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TPX2Q9ULW0 747 aaKnown RBP26.3■■□□□ 1.8
CPNE1-202ENST00000352393 RDXP35241 583 aaKnown RBP26.29■■□□□ 1.8
CPNE1-202ENST00000352393 CDR2Q01850 454 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 TAOK1Q7L7X3 1001 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 FAM160B2Q86V87 743 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 QTRT2Q9H974 415 aaKnown RBP26.29■■□□□ 1.8
CPNE1-202ENST00000352393 AAASQ9NRG9 546 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 SAMD15Q9P1V8 674 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 WHRNQ9P202 907 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 LYPLA2O95372 231 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 CYP11B1P15538 503 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 MAP2K1Q02750 393 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-202ENST00000352393 WLSQ5T9L3 541 aa26.29■■□□□ 1.8
CPNE1-202ENST00000352393 CDC42EP4Q9H3Q1 356 aaKnown RBP26.29■■□□□ 1.8
CPNE1-202ENST00000352393 ZNF536O15090 1300 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 FSCN2O14926 492 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 MGRN1O60291 552 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 MAP2K2P36507 400 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 NCKAP1LP55160 1127 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 CALCOCO2Q13137 446 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 NIPA1Q7RTP0 329 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 HELQQ8TDG4 1101 aa26.28■■□□□ 1.8
CPNE1-202ENST00000352393 NSRP1Q9H0G5 558 aaKnown RBP26.28■■□□□ 1.8
CPNE1-202ENST00000352393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.28■■□□□ 1.81e-6■■■■■ 117.8
CPNE1-202ENST00000352393 DLATP10515 647 aaKnown RBP26.27■■□□□ 1.8
CPNE1-202ENST00000352393 RHBDF2Q6PJF5 856 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 EXOC3L1Q86VI1 746 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 IL31RAQ8NI17 732 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 COL20A1Q9P218 1284 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 COQ4Q9Y3A0 265 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 GOLGA8IPA6NC78 632 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 GOLGA8JA6NMD2 632 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 CLDN3O15551 220 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 PDE6CP51160 858 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 KRT17Q04695 432 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 PPP1R7Q15435 360 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 CCDC25Q86WR0 208 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 CBWD2Q8IUF1 395 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 DDX1Q92499 740 aaKnown RBP26.27■■□□□ 1.8
CPNE1-202ENST00000352393 IWS1Q96ST2 819 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 POP1Q99575 1024 aaKnown RBP26.27■■□□□ 1.8
CPNE1-202ENST00000352393 ELAC2Q9BQ52 826 aaKnown RBP26.27■■□□□ 1.8
CPNE1-202ENST00000352393 FBXO28Q9NVF7 368 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 EP400Q96L91 3159 aa26.27■■□□□ 1.8
CPNE1-202ENST00000352393 TULP1O00294 542 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 SLC16A4O15374 487 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 OAS1P00973 400 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 MMP10P09238 476 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 QARSP47897 775 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 SPP2Q13103 211 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 SNRNP35Q16560 246 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 CCDC38Q502W7 563 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 NSMFQ6X4W1 530 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 KRT27Q7Z3Y8 459 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 TACO1Q9BSH4 297 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 DDX23Q9BUQ8 820 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 TIPINQ9BVW5 301 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 PSME4Q14997 1843 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 VIMP08670 466 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 HMGB2P26583 209 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 IFNAR2P48551 515 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 GPC3P51654 580 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 TNIP1Q15025 636 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 KRT39Q6A163 491 aa26.26■■□□□ 1.79
CPNE1-202ENST00000352393 AGO4Q9HCK5 861 aaKnown RBP26.26■■□□□ 1.79
CPNE1-202ENST00000352393 ADSSP30520 456 aa26.25■■□□□ 1.79
CPNE1-202ENST00000352393 ELF3P78545 371 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-202ENST00000352393 AOC3Q16853 763 aa26.25■■□□□ 1.79
CPNE1-202ENST00000352393 MSL1Q68DK7 614 aa26.25■■□□□ 1.79
CPNE1-202ENST00000352393 HOMER3Q9NSC5 361 aa26.25■■□□□ 1.79
CPNE1-202ENST00000352393 FEM1BQ9UK73 627 aa26.25■■□□□ 1.79
CPNE1-202ENST00000352393 TCP10L2B9ZVM9 353 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 GRIN3BO60391 1043 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 ZYXQ15942 572 aaKnown RBP26.24■■□□□ 1.79
CPNE1-202ENST00000352393 LONRF1Q17RB8 773 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 SGO2Q562F6 1265 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 ACAD10Q6JQN1 1059 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 TRPM8Q7Z2W7 1104 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 RPAINQ86UA6 219 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 C1orf54Q8WWF1 131 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 SERPINB12Q96P63 405 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 CCDC113Q9H0I3 377 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 TMEM8AQ9HCN3 771 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 GPRC5CQ9NQ84 441 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-202ENST00000352393 YWHABP31946 246 aaKnown RBP26.24■■□□□ 1.79
CPNE1-202ENST00000352393 PEX3P56589 373 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 TKFCQ3LXA3 575 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 PARD3BQ8TEW8 1205 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 PLVAPQ9BX97 442 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 MCM8Q9UJA3 840 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 UBIAD1Q9Y5Z9 338 aa26.24■■□□□ 1.79
CPNE1-202ENST00000352393 ASTN2O75129 1339 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-202ENST00000352393 SNX3O60493 162 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 NBPF9Q3BBW0 867 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 SAMD1Q6SPF0 538 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-202ENST00000352393 NT5C1BQ96P26 610 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 SH2D3AQ9BRG2 576 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 TMOD2Q9NZR1 351 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 TMEM150BA6NC51 233 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms