RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 RSRC1Q96IZ7 334 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 TTC25Q96NG3 672 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PDE11AQ9HCR9 933 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TMEM260Q9NX78 707 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SLC24A2Q9UI40 661 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ABCC1P33527 1531 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 AKR1B15C9JRZ8 316 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 CHL1O00533 1208 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SPTLC2O15270 562 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 STX10O60499 249 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TADA3O75528 432 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 HTR3BO95264 441 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 FCGR1AP12314 374 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TPH1P17752 444 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 MAPK3P27361 379 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 PPARDQ03181 441 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TEFQ10587 303 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NR5A1Q13285 461 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 MPP2Q14168 576 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TMEM154Q6P9G4 183 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 REC114Q7Z4M0 266 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CNGA4Q8IV77 575 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 IQUBQ8NA54 791 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TOR1AIP2Q8NFQ8 470 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 C1orf216Q8TAB5 229 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SLC5A5Q92911 643 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TTC14Q96N46 770 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TMEM140Q9NV12 185 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TMOD2Q9NZR1 351 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 LIMA1Q9UHB6 759 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TEX13CA0A0J9YWL9 993 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 LINC01387J3KSC0 135 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TOR1BO14657 336 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SLC27A2O14975 620 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ATP2C2O75185 946 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 MAP3K6O95382 1288 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CYP1A1P04798 512 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 EPHX1P07099 455 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 RHOXF2BP0C7M4 288 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 RACK1P63244 317 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 CCZ1BP86790 482 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CCZ1P86791 482 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 TAP1Q03518 808 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PDCLQ13371 301 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 VSIG1Q86XK7 387 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NSUN6Q8TEA1 469 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 RHOXF2Q9BQY4 288 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CRB3Q9BUF7 120 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PARD6BQ9BYG5 372 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 INO80BQ9C086 356 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.38□□□□□ -1.39
RFC1-201ENST00000349703 ARNT2Q9HBZ2 717 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NPDC1Q9NQX5 325 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 PAPOLBQ9NRJ5 636 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 PAG1Q9NWQ8 432 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 VPS4AQ9UN37 437 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PCDHB5Q9Y5E4 795 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PCDHA11Q9Y5I1 949 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ABCA9Q8IUA7 1624 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 HLA-DPA1P20036 260 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 EPS15P42566 896 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PEX5P50542 639 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ALDH18A1P54886 795 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 C19orf57Q0VDD7 668 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 WASHC5Q12768 1159 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NEDD9Q14511 834 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 FAM153CQ494X1 144 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CCDC40Q4G0X9 1142 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ASPRV1Q53RT3 343 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NINJ1Q92982 152 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 NUDCD1Q96RS6 583 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PLIN2Q99541 437 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 CHMP1AQ9HD42 196 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 CTNNAL1Q9UBT7 734 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SPEF1Q9Y4P9 236 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 ABCA6Q8N139 1617 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 QRICH2Q9H0J4 1663 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 GOLGA8KD6RF30 607 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 LTFP02788 710 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 ITGA2BP08514 1039 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 ARF4P18085 180 aaPredicted RBP6.37□□□□□ -1.39
RFC1-201ENST00000349703 MAOBP27338 520 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 STIM1Q13586 685 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 SPDYE7PQ495Y7 208 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 PPM1JQ5JR12 505 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 SNX30Q5VWJ9 437 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 ADALQ6DHV7 355 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 CCDC121Q6ZUS5 278 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 C11orf57Q6ZUT1 292 aaPredicted RBP6.37□□□□□ -1.39
RFC1-201ENST00000349703 TBC1D1Q86TI0 1168 aaPredicted RBP6.37□□□□□ -1.39
RFC1-201ENST00000349703 ADCK1Q86TW2 530 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 HID1Q8IV36 788 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
RFC1-201ENST00000349703 THOC1Q96FV9 657 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms