RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SLC1A1P43005 524 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 STAT5BP51692 787 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 ARFIP2P53365 341 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 GAS2L3Q86XJ1 694 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 SLC44A5Q8NCS7 719 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 OXER1Q8TDS5 423 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 RNF103-CHMP3A0A140T963 221 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 CHUKO15111 745 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 LAMB3Q13751 1172 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 ALX1Q15699 326 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 FRMD5Q7Z6J6 570 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 SPDYE5A6NIY4 337 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 SPDYE7PQ495Y7 208 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 CNPY4Q8N129 248 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 EMSYQ7Z589 1322 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 SLC16A3O15427 465 aaKnown RBP24.41■■□□□ 1.5
NPAS3-201ENST00000346562 LDHDQ86WU2 507 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 ELP3Q9H9T3 547 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 EYA4O95677 639 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 TYK2P29597 1187 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 TRADDQ15628 312 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 MTHFD1LQ6UB35 978 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 PID1Q7Z2X4 250 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 ABHD8Q96I13 439 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 ZSCAN9O15535 394 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-201ENST00000346562 TADA2AO75478 443 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 HIST1H2AGP0C0S8 130 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-201ENST00000346562 HIST1H2ADP20671 130 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 AP2B1P63010 937 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 RNF149Q8NC42 400 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 GTF3C2Q8WUA4 911 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-201ENST00000346562 HIST1H2AHQ96KK5 128 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 HIST1H2AJQ99878 128 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 H2AFJQ9BTM1 129 aa24.41■■□□□ 1.5
NPAS3-201ENST00000346562 ZNF211Q13398 564 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 HAUS6Q7Z4H7 955 aa24.4■■□□□ 1.5
NPAS3-201ENST00000346562 ZC3H18Q86VM9 953 aaKnown RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 MB21D2Q8IYB1 491 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 LBHD1Q9BQE6 289 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 SYNDIG1Q9H7V2 258 aa24.4■■□□□ 1.5
NPAS3-201ENST00000346562 HDAC4P56524 1084 aa24.4■■□□□ 1.5
NPAS3-201ENST00000346562 CACNB2Q08289 660 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 MAP3K10Q02779 954 aa24.4■■□□□ 1.5
NPAS3-201ENST00000346562 GUF1Q8N442 669 aaKnown RBP24.4■■□□□ 1.5
NPAS3-201ENST00000346562 PARK7Q99497 189 aaKnown RBP24.39■■□□□ 1.5
NPAS3-201ENST00000346562 ORC4O43929 436 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 HMGCS2P54868 508 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 IZUMO3Q5VZ72 239 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 ZNF746Q6NUN9 644 aaPredicted RBP24.39■■□□□ 1.5
NPAS3-201ENST00000346562 TGS1Q96RS0 853 aaKnown RBP24.39■■□□□ 1.5
NPAS3-201ENST00000346562 OSBPL9Q96SU4 736 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 CCDC90BQ9GZT6 254 aa24.39■■□□□ 1.5
NPAS3-201ENST00000346562 MTMR2Q13614 643 aa24.39■■□□□ 1.49
NPAS3-201ENST00000346562 PKN3Q6P5Z2 889 aa24.39■■□□□ 1.49
NPAS3-201ENST00000346562 CCDC137Q6PK04 289 aaKnown RBP24.39■■□□□ 1.49
NPAS3-201ENST00000346562 MAD2L2Q9UI95 211 aa24.39■■□□□ 1.49
NPAS3-201ENST00000346562 RBP5P82980 135 aa24.39■■□□□ 1.49
NPAS3-201ENST00000346562 BEND6Q5SZJ8 279 aaPredicted RBP24.39■■□□□ 1.49
NPAS3-201ENST00000346562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.39■■□□□ 1.49
NPAS3-201ENST00000346562 KIF28PB7ZC32 967 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 CCDC22O60826 627 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 CD2BP2O95400 341 aaKnown RBP24.38■■□□□ 1.49
NPAS3-201ENST00000346562 DHX34Q14147 1143 aaKnown RBP24.38■■□□□ 1.49
NPAS3-201ENST00000346562 RFFLQ8WZ73 363 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 ABCE1P61221 599 aaKnown RBP24.38■■□□□ 1.49
NPAS3-201ENST00000346562 AGPAT1Q99943 283 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 SLC13A1Q9BZW2 595 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 RUBCNLQ9H714 662 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 OLFML3Q9NRN5 406 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 ARIH2O95376 493 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 HMOX2P30519 316 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 PPP2R2AP63151 447 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 MED15Q96RN5 788 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 YIPF2Q9BWQ6 316 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 ATP9BO43861 1147 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 RTN2O75298 545 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 KRT4P19013 534 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 MAGOHP61326 146 aaKnown RBP24.38■■□□□ 1.49
NPAS3-201ENST00000346562 C16orf87Q6PH81 154 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 PPP1R2P1Q96PQ5 205 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 DOLKQ9UPQ8 538 aa24.38■■□□□ 1.49
NPAS3-201ENST00000346562 SUPT3HO75486 399 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 CYP19A1P11511 503 aaPredicted RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 LRRC8EQ6NSJ5 796 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 STKLD1Q8NE28 680 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 TSPAN17Q96FV3 270 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 SMARCAD1Q9H4L7 1026 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 ARHGAP26Q9UNA1 814 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 EIF3EP60228 445 aaKnown RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 ZFYVE28Q9HCC9 887 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 C3orf70A6NLC5 250 aaPredicted RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 C5orf58C9J3I9 102 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 PDAP1Q13442 181 aaKnown RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 MAP3K4Q9Y6R4 1608 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 CYP27B1O15528 508 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 TDP2O95551 362 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 GH1P01241 217 aa24.37■■□□□ 1.49
NPAS3-201ENST00000346562 TAF1CQ15572 869 aaPredicted RBP24.37■■□□□ 1.49
NPAS3-201ENST00000346562 IER5Q5VY09 327 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms