RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 LIG1P18858 919 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 NTHL1P78549 312 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 GRIK3Q13003 919 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 TDGQ13569 410 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 SIX5Q8N196 739 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 C4orf32Q8N8J7 132 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 SMG7Q92540 1137 aaKnown RBP12.12□□□□□ -0.47
UBE2A-201ENST00000346330 ACSF2Q96CM8 615 aaPredicted RBP12.12□□□□□ -0.47
UBE2A-201ENST00000346330 CCDC43Q96MW1 224 aaKnown RBP12.12□□□□□ -0.47
UBE2A-201ENST00000346330 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
UBE2A-201ENST00000346330 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 MYO10Q9HD67 2058 aa12.12□□□□□ -0.47
UBE2A-201ENST00000346330 PAPLNO95428 1278 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 CFHP08603 1231 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 OR52Z1P0C646 297 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 CYP11B2P19099 503 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 GBP2P32456 591 aaPredicted RBP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 TRIM29Q14134 588 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 KIF2CQ99661 725 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 CLSTN3Q9BQT9 956 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 COLEC11Q9BWP8 271 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 MFSD1Q9H3U5 465 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 TUFT1Q9NNX1 390 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
UBE2A-201ENST00000346330 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
UBE2A-201ENST00000346330 GVINP1Q7Z2Y8 2422 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 PP2D1A8MPX8 630 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 TADA2AO75478 443 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 PRKCBP05771 671 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 RPA1P27694 616 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
UBE2A-201ENST00000346330 TUSC3Q13454 348 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
UBE2A-201ENST00000346330 FAM187BQ17R55 369 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 GLRA4Q5JXX5 417 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
UBE2A-201ENST00000346330 GET4Q7L5D6 327 aaPredicted RBP12.1□□□□□ -0.47
UBE2A-201ENST00000346330 FRMD5Q7Z6J6 570 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 CEP120Q8N960 986 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 MCPH1Q8NEM0 835 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 LNX1Q8TBB1 728 aaPredicted RBP12.1□□□□□ -0.47
UBE2A-201ENST00000346330 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 GOLGA2P5Q9HBQ8 144 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 ZNF292O60281 2723 aa12.1□□□□□ -0.47
UBE2A-201ENST00000346330 ARHGEF35A5YM69 484 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 ACKR2O00590 384 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 MEFVO15553 781 aaPredicted RBP12.09□□□□□ -0.47
UBE2A-201ENST00000346330 ST18O60284 1047 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 NEFLP07196 543 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 AOC1P19801 751 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 CDC25AP30304 524 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 CLCN5P51795 746 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 SOX4Q06945 474 aaPredicted RBP12.09□□□□□ -0.47
UBE2A-201ENST00000346330 IL17AQ16552 155 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
UBE2A-201ENST00000346330 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 DAW1Q8N136 415 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 FBXO18Q8NFZ0 1043 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 NACC1Q96RE7 527 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 FBXL21Q9UKT6 434 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 LIMCH1Q9UPQ0 1083 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
UBE2A-201ENST00000346330 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■■■ 43.1
UBE2A-201ENST00000346330 PRR23AA6NEV1 266 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 I3L4J1 428 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 N4BP3O15049 544 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 NR1I2O75469 434 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 ZMYND10O75800 440 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 LAMP2P13473 410 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 NBL1P41271 181 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 NAMPTP43490 491 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 HTR4Q13639 388 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 PSMD5Q16401 504 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 MAPK6Q16659 721 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 TAS1R3Q7RTX0 852 aa12.08□□□□□ -0.48
UBE2A-201ENST00000346330 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms