RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PARP2Q9UGN5 583 aa12.94□□□□□ -0.34
SNCA-202ENST00000345009 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
SNCA-202ENST00000345009 SIP14410 1827 aa12.94□□□□□ -0.34
SNCA-202ENST00000345009 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
SNCA-202ENST00000345009 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 PRPF6O94906 941 aaKnown RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 CLTAP09496 248 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 MYBP10242 640 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 PROZP22891 400 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 MCL1Q07820 350 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 STIM1Q13586 685 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 SPOUT1Q5T280 376 aaKnown RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 FAM109BQ6ICB4 259 aaPredicted RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 CDR2LQ86X02 465 aaPredicted RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 SMG8Q8ND04 991 aaKnown RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 POMGNT1Q8WZA1 660 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 ACAP3Q96P50 834 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 FAM193BQ96PV7 902 aaPredicted RBP12.93□□□□□ -0.34
SNCA-202ENST00000345009 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 APOL6Q9BWW8 343 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 USP20Q9Y2K6 914 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 ZMYM2Q9UBW7 1377 aa12.93□□□□□ -0.34
SNCA-202ENST00000345009 A0A0B4J269 797 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 LDHAP00338 332 aaKnown RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 CA3P07451 260 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 FGFR1P11362 822 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 HARSP12081 509 aaKnown RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 GARTP22102 1010 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 MCM4P33991 863 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 PPP1R2P41236 205 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 GRM5P41594 1212 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 CASP5P51878 434 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 STK4Q13043 487 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 EEF1DP3Q658K8 133 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 PPP2R2DQ66LE6 453 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 EPM2AIP1Q7L775 607 aaPredicted RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 LRRC43Q8N309 656 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 HELQQ8TDG4 1101 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 LPPQ93052 612 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 HPS3Q969F9 1004 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 ZNF689Q96CS4 500 aaPredicted RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 CDT1Q9H211 546 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 NXF3Q9H4D5 531 aaKnown RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 SNTG2Q9NY99 539 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 HES2Q9Y543 173 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 PCDHB12Q9Y5F1 795 aa12.92□□□□□ -0.34
SNCA-202ENST00000345009 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.92□□□□□ -0.34
SNCA-202ENST00000345009 ARL5CA6NH57 179 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 OGTO15294 1046 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 OFD1O75665 1012 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 EDN1P05305 212 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 AKAP5P24588 427 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 PBX2P40425 430 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 CAMK4Q16566 473 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 BMT2Q1RMZ1 405 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 ARMCX5Q6P1M9 558 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 AGMOQ6ZNB7 445 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 SCFD1Q8WVM8 642 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
SNCA-202ENST00000345009 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 NUP62CLQ9H1M0 184 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
SNCA-202ENST00000345009 PDXKO00764 312 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
SNCA-202ENST00000345009 RECQL4O94761 1208 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 RB1P06400 928 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 MYOGP15173 224 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 LAG3P18627 525 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 OSTNP61366 133 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 KCNA1Q09470 495 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 CD302Q8IX05 232 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 GUF1Q8N442 669 aaKnown RBP12.9□□□□□ -0.34
SNCA-202ENST00000345009 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
SNCA-202ENST00000345009 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms