RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TMX3Q96JJ7 454 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 ZFP42Q96MM3 310 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 WDR6Q9NNW5 1121 aaKnown RBP13.71□□□□□ -0.21
SGCA-202ENST00000344627 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
SGCA-202ENST00000344627 MIOSQ9NXC5 875 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.21
SGCA-202ENST00000344627 WNT16Q9UBV4 365 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 MYO10Q9HD67 2058 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 EFEMP2O95967 443 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 PRKCBP05771 671 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 MUTP22033 750 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 TOB1P50616 345 aaPredicted RBP13.7□□□□□ -0.22
SGCA-202ENST00000344627 GRIK3Q13003 919 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 PRPF4BQ13523 1007 aaKnown RBP13.7□□□□□ -0.22
SGCA-202ENST00000344627 PPP2R5AQ15172 486 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 ECM1Q16610 540 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 KANK3Q6NY19 840 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 BSNDQ8WZ55 320 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 DDX19AQ9NUU7 478 aaKnown RBP13.7□□□□□ -0.22
SGCA-202ENST00000344627 EPS15L1Q9UBC2 864 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 CDH22Q9UJ99 828 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 DNM3Q9UQ16 869 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
SGCA-202ENST00000344627 A0A1B0GUA9 196 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 N4BP3O15049 544 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 AOC1P19801 751 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 GJB2P29033 226 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 NAMPTP43490 491 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 ELAVL2Q12926 359 aaKnown RBP13.69□□□□□ -0.22
SGCA-202ENST00000344627 PDIA5Q14554 519 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 ADPGKQ9BRR6 497 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 KIFC3Q9BVG8 833 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 FZD8Q9H461 694 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 KCNK12Q9HB15 430 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 SMC3Q9UQE7 1217 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
SGCA-202ENST00000344627 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 PP2D1A8MPX8 630 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 LAD1O00515 517 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 TEX28O15482 410 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 TADA2AO75478 443 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 MYBP10242 640 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 CDC25AP30304 524 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 MCM2P49736 904 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
SGCA-202ENST00000344627 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 APBB1IPQ7Z5R6 666 aaPredicted RBP13.68□□□□□ -0.22
SGCA-202ENST00000344627 TMEM105Q8N8V8 129 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 MARCH5Q9NX47 278 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 SNTG2Q9NY99 539 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 FBXL21Q9UKT6 434 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 GDAQ9Y2T3 454 aa13.68□□□□□ -0.22
SGCA-202ENST00000344627 CLUHO75153 1309 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.22
SGCA-202ENST00000344627 PHLPP2Q6ZVD8 1323 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 E9PMD0 336 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 F8W810 466 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 H0Y858 1186 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 ACKR2O00590 384 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 ASGR2P07307 311 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 HOXA9P31269 272 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 EFNA5P52803 228 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 PEX3P56589 373 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 ADAM28Q9UKQ2 775 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 KMT2EQ8IZD2 1858 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 MYH11P35749 1972 aa13.67□□□□□ -0.22
SGCA-202ENST00000344627 TRIP11Q15643 1979 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 K7ERI5 159 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 PDGFBP01127 241 aaPredicted RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 POU2F2P09086 479 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
SGCA-202ENST00000344627 SRFP11831 508 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 IL17AQ16552 155 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 GLYCTKQ8IVS8 523 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 SMG7Q92540 1137 aaKnown RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 NKD2Q969F2 451 aaPredicted RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 PHOX2BQ99453 314 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 PLIN2Q99541 437 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms