RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CCDC6Q16204 474 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 CCDC121Q6ZUS5 278 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 SLC35F6Q8N357 371 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 KIFC3Q9BVG8 833 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 SPTLC3Q9NUV7 552 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 RGS16O15492 202 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 CTNNA1P35221 906 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 PPARGP37231 505 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 Q4G0T1 1027 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 SARM1Q6SZW1 724 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 HSPH1Q92598 858 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 MSRAQ9UJ68 235 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 PSEN2P49810 448 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 GDAP1Q8TB36 358 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 MIF4GDA9UHW6 222 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 ZBED1O96006 694 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 S100BP04271 92 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 TAP1Q03518 808 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 BRD3Q15059 726 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 CATSPER3Q86XQ3 398 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 ZBTB9Q96C00 473 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 EDEM3Q9BZQ6 932 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 NFAT5O94916 1531 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 TJP3O95049 919 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 CAPN2P17655 700 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 SNX17Q15036 470 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 GRIK4Q16099 956 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 ANAPC7Q9UJX3 599 aa17.48■□□□□ 0.39
SMARCA4-201ENST00000344626 LRG1P02750 347 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 EDRF1Q3B7T1 1238 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 TAF2Q6P1X5 1199 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 PARD3BQ8TEW8 1205 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 TBKBP1A7MCY6 615 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 MOCS3O95396 460 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 URODP06132 367 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CLTAP09496 248 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 ALDH1A3P47895 512 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 PPP6R3Q5H9R7 873 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 TTC13Q8NBP0 860 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 KIF2CQ99661 725 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 PNPLA4P41247 253 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 TMEM199Q8N511 208 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 COPS5Q92905 334 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CDC23Q9UJX2 597 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 FARP1Q9Y4F1 1045 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 SOWAHDA6NJG2 315 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 EXTL3O43909 919 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CABYRO75952 493 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 CPP00450 1065 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 PCSK1P29120 753 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
SMARCA4-201ENST00000344626 A0A087WZ62 844 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 MYMKA6NI61 221 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 LRRC53A6NM62 1247 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 SYT2Q8N9I0 419 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 FDXACB1Q9BRP7 624 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 PLEKHA4Q9H4M7 779 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 GPRC5CQ9NQ84 441 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 IP6K2Q9UHH9 426 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 CTDNEP1O95476 244 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 GUCY2FP51841 1108 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 ACRBPQ8NEB7 543 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 ANKS1AQ92625 1134 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 CDK17Q00537 523 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 DPYDQ12882 1025 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 THOC5Q13769 683 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 ELF2Q15723 593 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 CD302Q8IX05 232 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
SMARCA4-201ENST00000344626 A0A1W2PQC6 194 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 FTCDO95954 541 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 NCOA4Q13772 614 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 EFHC2Q5JST6 749 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 ABCC6O95255 1503 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 SLC37A4O43826 429 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 IKBKEQ14164 716 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 SCYL1Q96KG9 808 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 IGFLR1Q9H665 355 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms