RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 MAGEC3Q8TD91 643 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 SLCO2A1Q92959 643 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 CDC42EP4Q9H3Q1 356 aaKnown RBP24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 KCNH7Q9NS40 1196 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 CLDN3O15551 220 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 DHX15O43143 795 aaKnown RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 CYP11B1P15538 503 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 MFAP3P55082 362 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 PPP1R7Q15435 360 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 SAMD1Q6SPF0 538 aaPredicted RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 EXOC3L1Q86VI1 746 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 NLGN1Q8N2Q7 840 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 ROPN1BQ9BZX4 212 aaPredicted RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 CCDC113Q9H0I3 377 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 ROPN1Q9HAT0 212 aaPredicted RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 ZBTB21Q9ULJ3 1066 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 MCCD1P59942 119 aaPredicted RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 CDR2Q01850 454 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 CALCOCO2Q13137 446 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 CBWD2Q8IUF1 395 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 IL31RAQ8NI17 732 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 HELQQ8TDG4 1101 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 ST6GALNAC4Q9H4F1 302 aa24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.77■■□□□ 1.56
NKX2-3-201ENST00000344586 ZNFX1Q9P2E3 1918 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 HSD17B4P51659 736 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 ELF3P78545 371 aaPredicted RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 KRT17Q04695 432 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 MKRN4PQ13434 485 aaPredicted RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 ZYXQ15942 572 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 LONRF1Q17RB8 773 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 MSL1Q68DK7 614 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 NSRP1Q9H0G5 558 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 FBXO28Q9NVF7 368 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 WHRNQ9P202 907 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 COL20A1Q9P218 1284 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 MCM8Q9UJA3 840 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 FSCN2O14926 492 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 SLC16A4O15374 487 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 OAS1P00973 400 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 AFF2P51816 1311 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 SNRPFP62306 86 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 SPP2Q13103 211 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 TBC1D10BQ4KMP7 808 aaPredicted RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 RHBDF2Q6PJF5 856 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 GPATCH11Q8N954 259 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 C1orf54Q8WWF1 131 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 DDX1Q92499 740 aaKnown RBP24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 SH2D3AQ9BRG2 576 aa24.76■■□□□ 1.55
NKX2-3-201ENST00000344586 TMEM150BA6NC51 233 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 PDE6CP51160 858 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 LLGL1Q15334 1064 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 TRPM8Q7Z2W7 1104 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 SCLT1Q96NL6 688 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 DEFB129Q9H1M3 183 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 GPRC5CQ9NQ84 441 aa24.75■■□□□ 1.55
NKX2-3-201ENST00000344586 TCP10L2B9ZVM9 353 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 PLA2G6O60733 806 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 ACSL3O95573 720 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 CHKAP35790 457 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 NCKAP1LP55160 1127 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 SNRNP35Q16560 246 aaKnown RBP24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 SGO2Q562F6 1265 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 FAM160B2Q86V87 743 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 ABCF3Q9NUQ8 709 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 ADSSP30520 456 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 QARSP47897 775 aaKnown RBP24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 PEX3P56589 373 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 AOC3Q16853 763 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 OTUD6AQ7L8S5 288 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 AGO4Q9HCK5 861 aaKnown RBP24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 HOMER3Q9NSC5 361 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 COQ4Q9Y3A0 265 aa24.74■■□□□ 1.55
NKX2-3-201ENST00000344586 GRIN3BO60391 1043 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 SNX3O60493 162 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 MMP10P09238 476 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 YWHABP31946 246 aaKnown RBP24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 GPC3P51654 580 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 SNX1Q13596 522 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 KRT39Q6A163 491 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 ACAD10Q6JQN1 1059 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 CCDC127Q96BQ5 260 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 SAAL1Q96ER3 474 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 SERPINB12Q96P63 405 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 TACO1Q9BSH4 297 aaKnown RBP24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 LYPLA2O95372 231 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 ATP6V1G2O95670 118 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 NEDD9Q14511 834 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 LRRC14Q15048 493 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 UGCGQ16739 394 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 HIBCHQ6NVY1 386 aaPredicted RBP24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 VSTM1Q6UX27 236 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 DHX38Q92620 1227 aaKnown RBP24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 AGBL1Q96MI9 1066 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 CHST7Q9NS84 486 aa24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 ZNF219Q9P2Y4 722 aaPredicted RBP24.73■■□□□ 1.55
NKX2-3-201ENST00000344586 CREB1P16220 341 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 TNIP1Q15025 636 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 NBPF9Q3BBW0 867 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms