RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 MADDQ8WXG6 1647 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 CPA2P48052 419 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 DNAJC3Q13217 504 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 ZBTB18Q99592 522 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
TRIO-202ENST00000344204 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 AP5Z1O43299 807 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 ZBED1O96006 694 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 MFN2O95140 757 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 PPM1NQ8N819 430 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 RMND5BQ96G75 393 aaPredicted RBP14.38□□□□□ -0.11
TRIO-202ENST00000344204 PAIP1Q9H074 479 aaKnown RBP14.38□□□□□ -0.11
TRIO-202ENST00000344204 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
TRIO-202ENST00000344204 TMEM191CA6NGB0 347 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 TMEM191BP0C7N4 346 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 ELMSAN1Q6PJG2 1045 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
TRIO-202ENST00000344204 FANCAO15360 1455 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 H0YCG3 227 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SLC12A1Q13621 1099 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 RGS21Q2M5E4 152 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 DEPDC7Q96QD5 511 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIO-202ENST00000344204 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 KCNJ2P63252 427 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 ZNF844Q08AG5 666 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 XRCC4Q13426 336 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 C1orf50Q9BV19 199 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SYCP2LQ5T4T6 812 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 DRAXINQ8NBI3 349 aaPredicted RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 PSPC1Q8WXF1 523 aaKnown RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SFI1A8K8P3 1242 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 LZTS3O60299 673 aaPredicted RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 CHEK2O96017 543 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SRGNP10124 158 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 RFX1P22670 979 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 EPHB2P29323 1055 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 RSBN1Q5VWQ0 802 aaPredicted RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 MROH5Q6ZUA9 1318 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 ARHGEF37A1IGU5 675 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 AIM2O14862 343 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 TTLL1O95922 423 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 ZNF507Q8TCN5 953 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 MRGBPQ9NV56 204 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 WFS1O76024 890 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 CLEC4GQ6UXB4 293 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
TRIO-202ENST00000344204 GTSE1Q9NYZ3 720 aa14.37□□□□□ -0.11
TRIO-202ENST00000344204 PEX5P50542 639 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 GSTA3Q16772 222 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 C4orf33Q8N1A6 199 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 PHTF1Q9UMS5 762 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 CCDC153Q494R4 210 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 C1orf54Q8WWF1 131 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 QKIQ96PU8 341 aaKnown RBP eCLIP14.36□□□□□ -0.113e-7■■■■□ 23
TRIO-202ENST00000344204 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 PLGRKTQ9HBL7 147 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 KCNG1Q9UIX4 513 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 IPPQ9Y573 584 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 MAP3K4Q9Y6R4 1608 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 RHOBTB1O94844 696 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 C4BPBP20851 252 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 FOXN1O15353 648 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 CCDC166P0CW27 439 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 FCHO2Q0JRZ9 810 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 SLC18A3Q16572 532 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 ABCF3Q9NUQ8 709 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 ITGA6P23229 1130 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 SETD3Q86TU7 594 aaPredicted RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 ZNF180Q9UJW8 692 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 SHOX2O60902 331 aaPredicted RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 CCDC130P13994 396 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 JADE3Q92613 823 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 CALN1Q9BXU9 219 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 RUNX1T1Q06455 604 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 CYP26B1Q9NR63 512 aa14.36□□□□□ -0.11
TRIO-202ENST00000344204 PPARGP37231 505 aaPredicted RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 MCUQ8NE86 351 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms