RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TLR3O15455 904 aaKnown RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 CYP27B1O15528 508 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 PTPN4P29074 926 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 SKIV2L2P42285 1042 aaKnown RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 PEX3P56589 373 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 EZH2Q15910 746 aaKnown RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ZBTB8OSQ8IWT0 167 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 CXorf38Q8TB03 319 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 TEKT4Q8WW24 435 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 GLG1Q92896 1179 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 RNF34Q969K3 372 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGEF26Q96DR7 871 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 DYNLL2Q96FJ2 89 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 KDM3BQ7LBC6 1761 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 EYA4O95677 639 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 SRGAP2BP0DMP2 458 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ELF3P78545 371 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ACBD5Q5T8D3 534 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ERICH1Q86X53 443 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 FAM192AQ9GZU8 254 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 TRABDQ9H4I3 376 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 RIPK2O43353 540 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF189O75820 626 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 KLHL2O95198 593 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 SLC9A1P19634 815 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 OCA2Q04671 838 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 PIGHQ14442 188 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 PPP2R5DQ14738 602 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ACAD11Q709F0 780 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 HESX1Q9UBX0 185 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 COILP38432 576 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 GCLMP48507 274 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 JAK3P52333 1124 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF200P98182 395 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 KCNMA1Q12791 1236 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 DNAJC3Q13217 504 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 LLGL1Q15334 1064 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 CFAP36Q96G28 342 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 REEP2Q9BRK0 252 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 SAR1AQ9NR31 198 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 FAM205CA6NFA0 338 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 MGEA5O60502 916 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 TDP2O95551 362 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 PSMA2P25787 234 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 HDAC7Q8WUI4 952 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 INPP5DQ92835 1189 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 NGLY1Q96IV0 654 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 CDHR1Q96JP9 859 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 EHD2Q9NZN4 543 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 TTC7AQ9ULT0 858 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-203ENST00000343508 STARD13Q9Y3M8 1113 aa5.07□□□□□ -1.6
CSMD3-203ENST00000343508 F8VZ95 297 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 AHCYL1O43865 530 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TMCC1O94876 653 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 UBOX5O94941 541 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 RPA1P27694 616 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 EEF1DP29692 281 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PRELPP51888 382 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 MIS18BP1Q6P0N0 1132 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM139Q8IV31 216 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CPXCR1Q8N123 301 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF507Q8TCN5 953 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 DCAF4Q8WV16 495 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SCYL1Q96KG9 808 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CCDC138Q96M89 665 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 LRRIQ4A6NIV6 560 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FKBP6O75344 327 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ENO1P06733 434 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PAX7P23759 505 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 EEF1B2P24534 225 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SLC16A2P36021 539 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 WASHC2DQ5SRD0 308 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ERMARDQ5T6L9 678 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 C12orf60Q5U649 245 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 C11orf63Q6NUN7 778 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 C18orf8Q96DM3 657 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CEP170P1Q96L14 293 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 K7ERI5 159 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PRPSAP2O60256 369 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FAM153BP0C7A2 387 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PCYT1AP49585 367 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 KDSRQ06136 332 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 P3H1Q32P28 736 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FAM153CQ494X1 144 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 COBLL1Q53SF7 1204 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SYDE2Q5VT97 1194 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 WDR59Q6PJI9 974 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 LVRNQ6Q4G3 990 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 C3orf62Q6ZUJ4 267 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 RHPN2Q8IUC4 686 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SH3RF3Q8TEJ3 882 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SLC7A3Q8WY07 619 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 POLD4Q9HCU8 107 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF212Q9UDV6 495 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FAM153AQ9UHL3 310 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CCPG1Q9ULG6 757 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 AXIN2Q9Y2T1 843 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 EIF4E1BA6NMX2 242 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 GOLGA8SH3BPF8 625 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms