RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MAP9Q49MG5 647 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 SLFN12LQ6IEE8 588 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 MSL3Q8N5Y2 521 aaKnown RBP20.08■□□□□ 0.81
HOXA9-201ENST00000343483 FNBP1Q96RU3 617 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 HAPLN2Q9GZV7 340 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
HOXA9-201ENST00000343483 ZBTB42B2RXF5 422 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 PIGRP01833 764 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 EDN1P05305 212 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 SRGAP2CP0DJJ0 459 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 GPC3P51654 580 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 GALCP54803 685 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 MFAP3P55082 362 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 ITIH3Q06033 890 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 IFI16Q16666 785 aaKnown RBP20.07■□□□□ 0.8
HOXA9-201ENST00000343483 ZNF792Q3KQV3 632 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 LMBRD2Q68DH5 695 aaPredicted RBP20.07■□□□□ 0.8
HOXA9-201ENST00000343483 ANKRD23Q86SG2 305 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 MMGT1Q8N4V1 131 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 SLC20A1Q8WUM9 679 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 KCNN1Q92952 543 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 ELMO3Q96BJ8 720 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 KREMEN1Q96MU8 473 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 AGPAT1Q99943 283 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 SMARCAD1Q9H4L7 1026 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 TMEM134Q9H6X4 195 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 INTUQ9ULD6 942 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 AOC2O75106 756 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 GCLCP48506 637 aaPredicted RBP20.07■□□□□ 0.8
HOXA9-201ENST00000343483 GJC2Q5T442 439 aaPredicted RBP20.07■□□□□ 0.8
HOXA9-201ENST00000343483 IER5Q5VY09 327 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 SPATA4Q8NEY3 305 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 PACSIN2Q9UNF0 486 aaPredicted RBP20.07■□□□□ 0.8
HOXA9-201ENST00000343483 ATP8B3O60423 1300 aa20.07■□□□□ 0.8
HOXA9-201ENST00000343483 KIAA0391O15091 583 aaKnown RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 ZMYND10O75800 440 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 HARSP12081 509 aaKnown RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 TNNI1P19237 187 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 LAMTOR4Q0VGL1 99 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 MKRN4PQ13434 485 aaPredicted RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 PSMD6Q15008 389 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 PALB2Q86YC2 1186 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 TCP11Q8WWU5 503 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 RBAKQ9NYW8 714 aaPredicted RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 DIS3Q9Y2L1 958 aaKnown RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 ABCB4P21439 1286 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 SLC26A2P50443 739 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 ENPEPQ07075 957 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 ZBTB41Q5SVQ8 909 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 MEI1Q5TIA1 1274 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 RNF149Q8NC42 400 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 HELQQ8TDG4 1101 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 PI4K2AQ9BTU6 479 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 GOLPH3Q9H4A6 298 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 TAS2R14Q9NYV8 317 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 SMARCAL1Q9NZC9 954 aa20.06■□□□□ 0.8
HOXA9-201ENST00000343483 ZHX1Q9UKY1 873 aaPredicted RBP20.06■□□□□ 0.8
HOXA9-201ENST00000343483 A0A0B4J269 797 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
HOXA9-201ENST00000343483 ZNF157P51786 506 aaPredicted RBP20.05■□□□□ 0.8
HOXA9-201ENST00000343483 EFNA5P52803 228 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 WNT7BP56706 349 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 MXD4Q14582 209 aaPredicted RBP20.05■□□□□ 0.8
HOXA9-201ENST00000343483 SPRYD7Q5W111 196 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 CRELD2Q6UXH1 353 aaPredicted RBP20.05■□□□□ 0.8
HOXA9-201ENST00000343483 EXOC8Q8IYI6 725 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 FAM71AQ8IYT1 594 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 ZNF516Q92618 1163 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 CAPNS2Q96L46 248 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 EHD2Q9NZN4 543 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 MORF4L1Q9UBU8 362 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 MCM3APO60318 1980 aa20.05■□□□□ 0.8
HOXA9-201ENST00000343483 CYP26A1O43174 497 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 STRNO43815 780 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 TNNT3P45378 269 aaPredicted RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 ARHGAP1Q07960 439 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 PRPF4BQ13523 1007 aaKnown RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 TAPT1Q6NXT6 567 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 RHPN2Q8IUC4 686 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 RPUSD2Q8IZ73 545 aaKnown RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 CTNNBL1Q8WYA6 563 aaPredicted RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 SHC3Q92529 594 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 ZBTB10Q96DT7 871 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 ACBD3Q9H3P7 528 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 SUCLA2Q9P2R7 463 aaPredicted RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 A0A0A6YYK5 440 aaPredicted RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 TTLL13PA6NNM8 815 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 SGPL1O95470 568 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 LDHAP00338 332 aaKnown RBP20.04■□□□□ 0.8
HOXA9-201ENST00000343483 TMEM253P0C7T8 217 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 BIRC3Q13489 604 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 PTPROQ16827 1216 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 TAF3Q5VWG9 929 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 RGMBQ6NW40 437 aa20.04■□□□□ 0.8
HOXA9-201ENST00000343483 DPP9Q86TI2 863 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms