RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 USH1CQ9Y6N9 552 aa15.88■□□□□ 0.13
CLCN1-201ENST00000343257 CFAP69A5D8W1 941 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 PDXKO00764 312 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 KRT15P19012 456 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 GCLCP48506 637 aaPredicted RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 GORASP1Q9BQQ3 440 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 METTL14Q9HCE5 456 aaKnown RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ZFP69BQ9UJL9 534 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 GRID1Q9ULK0 1009 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 TP73O15350 636 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ETS2P15036 469 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 CNGA1P29973 690 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 KPNB1Q14974 876 aaKnown RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 TRMT1LQ7Z2T5 733 aaKnown RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 PCIF1Q9H4Z3 704 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 NUMBLQ9Y6R0 609 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 GPR75-ASB3A0A0A6YYF3 556 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 CAPN9O14815 690 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 TGFB1I1O43294 461 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ALAS1P13196 640 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 YY1P25490 414 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 MTM1Q13496 603 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 PARP6Q2NL67 630 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 TBC1D25Q3MII6 688 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 C2CD6Q53TS8 623 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ZC3H3Q8IXZ2 948 aaKnown RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ZNF333Q96JL9 665 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 OCEL1Q9H607 264 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLCN1-201ENST00000343257 ASB3Q9Y575 518 aa15.87■□□□□ 0.13
CLCN1-201ENST00000343257 CHMP2AO43633 222 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 BAG3O95817 575 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
CLCN1-201ENST00000343257 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
CLCN1-201ENST00000343257 GPC5P78333 572 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 EAPPQ56P03 285 aaPredicted RBP15.86■□□□□ 0.13
CLCN1-201ENST00000343257 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 MIPEPQ99797 713 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 NUP85Q9BW27 656 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 ARAP2Q8WZ64 1704 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 FAM47DPA6NHR8 397 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 ACADSP16219 412 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 PSMC2P35998 433 aaKnown RBP15.86■□□□□ 0.13
CLCN1-201ENST00000343257 BTDP43251 543 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 CPA2P48052 419 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 CUL3Q13618 768 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 TMEM63BQ5T3F8 832 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 RASIP1Q5U651 963 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 FOXR2Q6PJQ5 311 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 GBP5Q96PP8 586 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 PCDHB18PQ96TA0 734 aa15.86■□□□□ 0.13
CLCN1-201ENST00000343257 LRP5O75197 1615 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SGPL1O95470 568 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 CA4P22748 312 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SKIV2L2P42285 1042 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 RASSF2P50749 326 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MYL7Q01449 175 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 CDR2Q01850 454 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SIX1Q15475 284 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 CYFIP1Q7L576 1253 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 ARHGEF19Q8IW93 802 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 RHOT2Q8IXI1 618 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SLC5A5Q92911 643 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 HERPUD2Q9BSE4 406 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 UBE2OQ9C0C9 1292 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MYO3BQ8WXR4 1341 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 A0A0G2JND7 137 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 ESYT2A0FGR8 921 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MIF4GDA9UHW6 222 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 ATF2P15336 505 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MARK3P27448 753 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 RPA3P35244 121 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MKRN3Q13064 507 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 PKN2Q16513 984 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SLC5A9Q2M3M2 681 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 MTHFD1LQ6UB35 978 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 ARHGAP22Q7Z5H3 698 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 PRR11Q96HE9 360 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 R3HDM2Q9Y2K5 976 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 FAM13AO94988 1023 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 VHLP40337 213 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 DLG4P78352 724 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 LBRQ14739 615 aaKnown RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 SLC1A5Q15758 541 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 PPP1R21Q6ZMI0 780 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 NLRP9Q7RTR0 991 aa15.85■□□□□ 0.13
CLCN1-201ENST00000343257 ZNF564Q8TBZ8 553 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 KLF6Q99612 283 aaPredicted RBP15.85■□□□□ 0.13
CLCN1-201ENST00000343257 STOML1Q9UBI4 398 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms