RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ADCY9O60503 1353 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 KDM5CP41229 1560 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ANO9A1A5B4 782 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 POLR2FP61218 127 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 OTUD4Q01804 1114 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 C4orf50Q6ZRC1 276 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TMA16Q96EY4 203 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 PANK4Q9NVE7 773 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TMEM161AQ9NX61 479 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 YEATS2Q9ULM3 1422 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 BIVM-ERCC5R4GMW8 1640 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ANKRD26Q9UPS8 1709 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 POTECB2RU33 542 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 UBXN8O00124 270 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ZCCHC18P0CG32 403 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ATF6P18850 670 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 PTPREP23469 700 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 GMFBP60983 142 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 STK4Q13043 487 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SLC9C2Q5TAH2 1124 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 AGBL2Q5U5Z8 902 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 E4F1Q66K89 784 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 KRT40Q6A162 431 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ZNF804AQ7Z570 1209 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TCAIMQ8N3R3 496 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RFT1Q96AA3 541 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CDK19Q9BWU1 502 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 ENOPH1Q9UHY7 261 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 NUP50Q9UKX7 468 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TROQ12816 1431 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MIF4GDA9UHW6 222 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 NPR3P17342 541 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CHRNA3P32297 505 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CYP2J2P51589 502 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MFAP3P55082 362 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 FBXW4P57775 412 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 PTK2Q05397 1052 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 GRSF1Q12849 480 aaKnown RBP eCLIP6.49□□□□□ -1.37
VCAN-203ENST00000343200 NDUFAF6Q330K2 333 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 GPBP1Q86WP2 473 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ZCCHC7Q8N3Z6 543 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 DIS3LQ8TF46 1054 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 DCTPP1Q9H773 170 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TMEM165Q9HC07 324 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 GGA2Q9UJY4 613 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SMCO3A2RU48 225 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SSNA1O43805 119 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 NQO1P15559 274 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 ZNF280DQ6N043 979 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 KRT78Q8N1N4 520 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 USP13Q92995 863 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 CITED4Q96RK1 184 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 AP1M1Q9BXS5 423 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ELOVL6Q9H5J4 265 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SLITRK6Q9H5Y7 841 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SAYSD1Q9NPB0 183 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ASAP1Q9ULH1 1129 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CUL9Q8IWT3 2517 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MAPKBP1O60336 1514 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CALB1P05937 261 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 FAM58BPP0C7Q3 252 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 STAT5AP42229 794 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 STAT5BP51692 787 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 OASLQ15646 514 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SPAG16Q8N0X2 631 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 NUP93Q8N1F7 819 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MLXIPLQ9NP71 852 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ENTPD7Q9NQZ7 604 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ABHD10Q9NUJ1 306 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 WDR70Q9NW82 654 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CORO1CQ9ULV4 474 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 RAPGEF6Q8TEU7 1601 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MED7O43513 233 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CHN1P15882 459 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PEX5P50542 639 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 YARSP54577 528 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 RBBP7Q16576 425 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 TOM1L2Q6ZVM7 507 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PIK3C3Q8NEB9 887 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 NSL1Q96IY1 281 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZC3H10Q96K80 434 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 C20orf96Q9NUD7 363 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 LRWD1Q9UFC0 647 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 COMMD3-BMI1R4GMX3 469 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 FMN2Q9NZ56 1722 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZMYM6O95789 1325 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MYO1GB0I1T2 1018 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ABLIM1O14639 778 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SEC24BO95487 1268 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 KRT1P04264 644 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 TARSP26639 723 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 GTF2H1P32780 548 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 TTKP33981 857 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms