RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 WDR36Q8NI36 951 aaKnown RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 ABCB1P08183 1280 aaPredicted RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 UGP2Q16851 508 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TMEM154Q6P9G4 183 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 P2RX5Q93086 422 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 KIAA1586Q9HCI6 787 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 TJP2Q9UDY2 1190 aa18.55■□□□□ 0.56
SMAD4-201ENST00000342988 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
SMAD4-201ENST00000342988 MAGOHP61326 146 aaKnown RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 TTC33Q6PID6 262 aaPredicted RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 CYP4Z2PQ8N1L4 340 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 CDCA7Q9BWT1 371 aaPredicted RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 IQGAP2Q13576 1575 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 PRR23AA6NEV1 266 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 KLRF2D3W0D1 207 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 USP1O94782 785 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 PGM3O95394 542 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 GPS1Q13098 491 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 CYP4Z1Q86W10 505 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 FOXP1Q9H334 677 aaPredicted RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 MYBL1P10243 752 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 RGS4P49798 205 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 FAM167BQ9BTA0 163 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 PNMA8CA0A1B0GUJ8 204 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 EPS8Q12929 822 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 CBFBQ13951 182 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 OXCT2Q9BYC2 517 aaPredicted RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 UBXN6Q9BZV1 441 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 YWHABP31946 246 aaKnown RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 FAM47EQ6ZV65 393 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 CACNA1FO60840 1977 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 E7EWF7 191 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 RPL19P84098 196 aaKnown RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 C2CD6Q53TS8 623 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
SMAD4-201ENST00000342988 AMNQ9BXJ7 453 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 BFARQ9NZS9 450 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 NESP48681 1621 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 PPP2R3CQ969Q6 453 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 ENOPH1Q9UHY7 261 aa18.54■□□□□ 0.56
SMAD4-201ENST00000342988 RNFT2Q96EX2 444 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 ZNF235Q14590 738 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 MAP3K20Q9NYL2 800 aaKnown RBP18.53■□□□□ 0.56
SMAD4-201ENST00000342988 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 PLOD1Q02809 727 aaPredicted RBP18.53■□□□□ 0.56
SMAD4-201ENST00000342988 TRIM72Q6ZMU5 477 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 CNDP1Q96KN2 507 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 APOL4Q9BPW4 351 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 NDUFB5O43674 189 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 SNX4O95219 450 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 NPEPPSP55786 919 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 BTBD18B2RXH4 712 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 CHP2O43745 196 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 S100A6P06703 90 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 EFHC2Q5JST6 749 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 MAPKAPK5Q8IW41 473 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 STKLD1Q8NE28 680 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 ZFATQ9P243 1243 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 H2AFYO75367 372 aaKnown RBP18.53■□□□□ 0.56
SMAD4-201ENST00000342988 HSD17B4P51659 736 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 DGKHQ86XP1 1220 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 GRID2IPA4D2P6 1211 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 TRPM2O94759 1503 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 ANXA1P04083 346 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 DSG1Q02413 1049 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 DCTN2Q13561 401 aaKnown RBP18.53■□□□□ 0.56
SMAD4-201ENST00000342988 SLC25A13Q9UJS0 675 aa18.53■□□□□ 0.56
SMAD4-201ENST00000342988 H3BMM5 538 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 HUS1O60921 280 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 SOAT1P35610 550 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 VPS33AQ96AX1 596 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 CEP170P1Q96L14 293 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 K7ERI5 159 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 ICA1Q05084 483 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 RBL2Q08999 1139 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 ALFQ53S48 1182 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 OOSP2Q86WS3 158 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 FAM129BQ96TA1 746 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 S100A13Q99584 98 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 GTF2A1LQ9UNN4 478 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 TTLL1O95922 423 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 SMG5Q9UPR3 1016 aaKnown RBP18.52■□□□□ 0.56
SMAD4-201ENST00000342988 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 ZMYND11Q15326 602 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 SFR1Q86XK3 245 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 FAM9CQ8IZT9 166 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 MNTQ99583 582 aa18.52■□□□□ 0.56
SMAD4-201ENST00000342988 E7ENQ6 273 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms