RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 E2F6O75461 281 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ACOT2P49753 483 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ANKRD40Q6AI12 368 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ZNF34Q8IZ26 560 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 SLC38A7Q9NVC3 462 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 MAPK13O15264 365 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 STILQ15468 1287 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 FSCBQ5H9T9 825 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 SAMD7Q7Z3H4 446 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 CLEC10AQ8IUN9 316 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 GLYCTKQ8IVS8 523 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PITPNM3Q9BZ71 974 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 CASS4Q9NQ75 786 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 PDXKO00764 312 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 FRMD5Q7Z6J6 570 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SLC26A7Q8TE54 656 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 FBXO41Q8TF61 875 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SCFD2Q8WU76 684 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 DOLKQ9UPQ8 538 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 CFAP69A5D8W1 941 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 PIK3R2O00459 728 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 CTIFO43310 598 aaKnown RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 FCGRTP55899 365 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 RNF135Q8IUD6 432 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 MARCH10Q8NA82 808 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 GLT1D1Q96MS3 346 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 TEX12Q9BXU0 123 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 FAM96AQ9H5X1 160 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 FGFR1OP2Q9NVK5 253 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 PLAAQ9Y263 795 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 ATP6V1E1P36543 226 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 MORF4L2Q15014 288 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 RNF180Q86T96 592 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 TMEM39BQ9GZU3 492 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 WNT8AQ9H1J5 351 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 AIPL1Q9NZN9 384 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SCAF8Q9UPN6 1271 aaKnown RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 PRPF4O43172 522 aaKnown RBP eCLIP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 ZNF189O75820 626 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 CD4P01730 458 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 NR1H3Q13133 447 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 EMC2Q15006 297 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SMAD1Q15797 465 aaKnown RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 ZC3H18Q86VM9 953 aaKnown RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 SYT2Q8N9I0 419 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-202ENST00000342494 STKLD1Q8NE28 680 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 C18orf8Q96DM3 657 aa15.88■□□□□ 0.13
UBE3B-202ENST00000342494 DGKDQ16760 1214 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 GOLPH3LQ9H4A5 285 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 CYP26A1O43174 497 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 ATP9BO43861 1147 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 OR1G1P47890 313 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 ARL4DP49703 201 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 MGAT5BQ3V5L5 792 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 SBK1Q52WX2 424 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 KDELC2Q7Z4H8 507 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 DCP1BQ8IZD4 617 aaKnown RBP15.87■□□□□ 0.13
UBE3B-202ENST00000342494 CHST13Q8NET6 341 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 SH3BP1Q9Y3L3 701 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 KRT14P02533 472 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 RFC5P40937 340 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 CPT1AP50416 773 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
UBE3B-202ENST00000342494 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 PDIA2Q13087 525 aaKnown RBP15.87■□□□□ 0.13
UBE3B-202ENST00000342494 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 PDGFRBP09619 1106 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 CHRNA3P32297 505 aa15.87■□□□□ 0.13
UBE3B-202ENST00000342494 RGS7P49802 495 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 MDM2Q00987 491 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 FMR1NBQ8N0W7 255 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 TBC1D19Q8N5T2 526 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 MED15Q96RN5 788 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 INTUQ9ULD6 942 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 VCPP55072 806 aaKnown RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 ACTR2P61160 394 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 PRKCEQ02156 737 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 THOC1Q96FV9 657 aaKnown RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 BTBD6Q96KE9 485 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 RBBP7Q16576 425 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 SYTL3Q4VX76 610 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 FASTKD1Q53R41 847 aaKnown RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 EPM2AIP1Q7L775 607 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-202ENST00000342494 ZBED8Q8IZ13 594 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 TEKT2Q9UIF3 430 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 ANO9A1A5B4 782 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 IRF1P10914 325 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 CASP8Q14790 479 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 HIPK4Q8NE63 616 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 TRIM33Q9UPN9 1127 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 CLCA2Q9UQC9 943 aa15.86■□□□□ 0.13
UBE3B-202ENST00000342494 A0A087WUV0 522 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms