RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 NXF3Q9H4D5 531 aaKnown RBP18.82■□□□□ 0.6
TRA2B-202ENST00000342294 VAV3Q9UKW4 847 aa18.82■□□□□ 0.6
TRA2B-202ENST00000342294 CHD8Q9HCK8 2581 aa18.82■□□□□ 0.6
TRA2B-202ENST00000342294 DKC1O60832 514 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRA2B-202ENST00000342294 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
TRA2B-202ENST00000342294 C8AP07357 584 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 TDGF1P13385 188 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 IFNAR1P17181 557 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 NLRP5P59047 1200 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 POU5F1BQ06416 359 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 GRIK3Q13003 919 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 EMC2Q15006 297 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 PPM1LQ5SGD2 360 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 LIN9Q5TKA1 542 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 Q6ZUG5 572 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 TPRG1Q6ZUI0 275 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 NPAS3Q8IXF0 933 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 C4orf19Q8IY42 314 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 ZNF687Q8N1G0 1237 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 FBXL16Q8N461 479 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
TRA2B-202ENST00000342294 PIK3R5Q8WYR1 880 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 APOL6Q9BWW8 343 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 SLC26A6Q9BXS9 759 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
TRA2B-202ENST00000342294 CACNG4Q9UBN1 327 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 PCDHA4Q9UN74 947 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 ZMYM2Q9UBW7 1377 aa18.81■□□□□ 0.6
TRA2B-202ENST00000342294 NCAM2O15394 837 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 CCL16O15467 120 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 TADA2AO75478 443 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 AKAP5P24588 427 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 FGD1P98174 961 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 HSP90AA2PQ14568 343 aaPredicted RBP18.8■□□□□ 0.6
TRA2B-202ENST00000342294 PAAF1Q9BRP4 392 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 XPNPEP1Q9NQW7 623 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 KCNH3Q9ULD8 1083 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 USP24Q9UPU5 2620 aa18.8■□□□□ 0.6
TRA2B-202ENST00000342294 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.65e-6■■■■■ 39
TRA2B-202ENST00000342294 CHD6Q8TD26 2715 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 SLC30A4O14863 429 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 ADAM12O43184 909 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 SLC37A4O43826 429 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 XYLBO75191 536 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 ARF4P18085 180 aaPredicted RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 YWHABP31946 246 aaKnown RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 MBTD1Q05BQ5 628 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 NCBP1Q09161 790 aaKnown RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 MTAPQ13126 283 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 MXD4Q14582 209 aaPredicted RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 NPY5RQ15761 445 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 ZNF852Q6ZMS4 543 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 MAMSTRQ6ZN01 415 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 HACE1Q8IYU2 909 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 AGXT2Q9BYV1 514 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 PLA2G2FQ9BZM2 168 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 KCNMB3Q9NPA1 279 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 DNMT3BQ9UBC3 853 aaKnown RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 DDX25Q9UHL0 483 aaKnown RBP18.79■□□□□ 0.6
TRA2B-202ENST00000342294 GMEB2Q9UKD1 530 aa18.79■□□□□ 0.6
TRA2B-202ENST00000342294 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 ECI2O75521 394 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 ADCY1Q08828 1119 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 PSMD5Q16401 504 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 UVSSAQ2YD98 709 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 POTEHQ6S545 545 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 KCNB2Q92953 911 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 FAM20AQ96MK3 541 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 MTRQ99707 1265 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 HEBP1Q9NRV9 189 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 HCFC1R1Q9NWW0 138 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 KLK14Q9P0G3 267 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 MRPS17Q9Y2R5 130 aaKnown RBP18.78■□□□□ 0.6
TRA2B-202ENST00000342294 CACNA1GO43497 2377 aa18.78■□□□□ 0.6
TRA2B-202ENST00000342294 ZFHX4Q86UP3 3567 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 TDRD15B5MCY1 1934 aaKnown RBP18.77■□□□□ 0.6
TRA2B-202ENST00000342294 ZBTB39O15060 712 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 B4GALT5O43286 388 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 SPEM2Q0P670 501 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 TUSC3Q13454 348 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 RAB33AQ14088 237 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 EPHA7Q15375 998 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 PABPC1LQ4VXU2 614 aaKnown RBP18.77■□□□□ 0.6
TRA2B-202ENST00000342294 XKR9Q5GH70 373 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 PPM1JQ5JR12 505 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 FAM171A1Q5VUB5 890 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 BLIDQ8IZY5 108 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 SLC7A14Q8TBB6 771 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 NETO1Q8TDF5 533 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 LXNQ9BS40 222 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 TRIM6Q9C030 488 aaPredicted RBP18.77■□□□□ 0.6
TRA2B-202ENST00000342294 RGL1Q9NZL6 768 aa18.77■□□□□ 0.6
TRA2B-202ENST00000342294 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.77■□□□□ 0.6
TRA2B-202ENST00000342294 NOTCH4Q99466 2003 aa18.76■□□□□ 0.59
TRA2B-202ENST00000342294 A0A1B0GUA9 196 aa18.76■□□□□ 0.59
TRA2B-202ENST00000342294 LRP3O75074 770 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms