RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 MROH1Q8NDA8 1641 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 HUS1O60921 280 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 ANTXR2P58335 489 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 CEP55Q53EZ4 464 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 RNF219Q5W0B1 726 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 NUDT18Q6ZVK8 323 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 P2RX7Q99572 595 aaKnown RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 PMS2P54278 862 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 TAP1Q03518 808 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 CDO1Q16878 200 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 NGRNQ9NPE2 291 aaKnown RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 ERAP1Q9NZ08 941 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 KCND2Q9NZV8 630 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 BNIP3LO60238 219 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 HSPA8P11142 646 aaKnown RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 PPP4CP60510 307 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 FBXO16Q8IX29 292 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 KPNA6O60684 536 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 DCTN3O75935 186 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 GNA15P30679 374 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 FKBP1AP62942 108 aaKnown RBP13.65□□□□□ -0.22
DNMT1-201ENST00000340748 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
DNMT1-201ENST00000340748 KRT7P08729 469 aa13.65□□□□□ -0.23
DNMT1-201ENST00000340748 RASA1P20936 1047 aa13.65□□□□□ -0.23
DNMT1-201ENST00000340748 TERF2Q15554 542 aa13.65□□□□□ -0.23
DNMT1-201ENST00000340748 PAN2Q504Q3 1202 aaKnown RBP13.65□□□□□ -0.23
DNMT1-201ENST00000340748 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.23
DNMT1-201ENST00000340748 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.23
DNMT1-201ENST00000340748 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.23
DNMT1-201ENST00000340748 MMEP08473 750 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 PAMP19021 973 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ADORA2AP29274 412 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 GGCXP38435 758 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ALDH7A1P49419 539 aaKnown RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 SKA2Q8WVK7 121 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 FGFR1OP2Q9NVK5 253 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 MAGEB2O15479 319 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 DHX34Q14147 1143 aaKnown RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ERVK-9P63128 1117 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ERVK-24P63145 666 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 KLC3Q6P597 504 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 MCUQ8NE86 351 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 EPB41L4AQ9HCS5 686 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 NCK2O43639 380 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-201ENST00000340748 FSTL1Q12841 308 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 PASD1Q8IV76 773 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 ATP6V1E2Q96A05 226 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 FAM96AQ9H5X1 160 aa13.64□□□□□ -0.23
DNMT1-201ENST00000340748 STXBP3O00186 592 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 CTIFO43310 598 aaKnown RBP13.63□□□□□ -0.23
DNMT1-201ENST00000340748 KRT38O76015 456 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 EFNA5P52803 228 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 EFHD1Q9BUP0 239 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 ADAM21Q9UKJ8 722 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 ESYT2A0FGR8 921 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 IRF6O14896 467 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 ZNF394Q53GI3 561 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 COPEO14579 308 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 PRRG1O14668 218 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 NR1I3Q14994 352 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 NUGGCQ68CJ6 796 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 SSU72P8A0A1W2PR75 194 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 YWHABP31946 246 aaKnown RBP13.63□□□□□ -0.23
DNMT1-201ENST00000340748 TAF1BQ53T94 588 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-201ENST00000340748 CRLF3Q8IUI8 442 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
DNMT1-201ENST00000340748 MAGED2Q9UNF1 606 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-201ENST00000340748 RTN2O75298 545 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ATP1A1P05023 1023 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ITGA4P13612 1032 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SSTR3P32745 418 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SLC1A1P43005 524 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 OR1G1P47890 313 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 CCZ1BP86790 482 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms