RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.47■□□□□ 0.23
TUBB4B-201ENST00000340384 JRKLQ9Y4A0 524 aa16.47■□□□□ 0.23
TUBB4B-201ENST00000340384 FHOD1Q9Y613 1164 aa16.47■□□□□ 0.23
TUBB4B-201ENST00000340384 V9GYY5 206 aaPredicted RBP16.47■□□□□ 0.23
TUBB4B-201ENST00000340384 KIAA0100Q14667 2235 aaKnown RBP16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 MACROD2A1Z1Q3 448 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 DENND3A2RUS2 1198 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 PMM2O15305 246 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 C22orf31O95567 290 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 ABL1P00519 1130 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 JAM2P57087 298 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 IGBP1P78318 339 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 GRIK4Q16099 956 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 ZNF484Q5JVG2 852 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 PAPD7Q5XG87 772 aaKnown RBP16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 EXOC8Q8IYI6 725 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 LINC01465Q8N7H1 131 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 RPGRIP1Q96KN7 1286 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 KATNAL1Q9BW62 490 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 STK33Q9BYT3 514 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
TUBB4B-201ENST00000340384 MBLAC1A4D2B0 266 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CTAGE15A4D2H0 777 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 MAFO75444 373 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CABYRO75952 493 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CTAGE8P0CG41 777 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 KLRC1P26715 233 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 ARID5AQ03989 594 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 NAA30Q147X3 362 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 IQCEQ6IPM2 695 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 GDF6Q6KF10 455 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 RSRC2Q7L4I2 434 aaKnown RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 TRAPPC11Q7Z392 1133 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CTAGE6Q86UF2 777 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 SESTD1Q86VW0 696 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CTAGE4Q8IX94 777 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 KCNN1Q92952 543 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 INTS2Q9H0H0 1204 aaKnown RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 POLR3FQ9H1D9 316 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 PCIF1Q9H4Z3 704 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 GTF2IRD1Q9UHL9 959 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 RCCD1A6NED2 376 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 TREHO43280 583 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 GARTP22102 1010 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CDK7P50613 346 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 MCCD1P59942 119 aaPredicted RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 AMPD2Q01433 879 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 EMC2Q15006 297 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 IFI16Q16666 785 aaKnown RBP16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 GLT1D1Q96MS3 346 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 CBWD1Q9BRT8 395 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 APEX2Q9UBZ4 518 aa16.45■□□□□ 0.22
TUBB4B-201ENST00000340384 NRCAMQ92823 1304 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 COL1A2P08123 1366 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 TUBBP07437 444 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 SOX5P35711 763 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 STRN3Q13033 797 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 TEX35Q5T0J7 233 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 NFRKBQ6P4R8 1299 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 WNT8BQ93098 351 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 STARD7Q9NQZ5 370 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 DNAJC12Q9UKB3 198 aa16.44■□□□□ 0.22
TUBB4B-201ENST00000340384 BTNL10A8MVZ5 291 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 PRLRP16471 622 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 GTF2H1P32780 548 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 NAMPTP43490 491 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 APBA1Q02410 837 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 CBWD6Q4V339 395 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 CBWD3Q5JTY5 395 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 CBWD5Q5RIA9 395 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 LRRC71Q8N4P6 559 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 ANKLE1Q8NAG6 615 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 TMC2Q8TDI7 906 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 BICD1Q96G01 975 aa16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
TUBB4B-201ENST00000340384 ARHGAP28Q9P2N2 729 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms