RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 RNF169Q8NCN4 708 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 ACAP3Q96P50 834 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
CSRP1-201ENST00000340006 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
CSRP1-201ENST00000340006 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
CSRP1-201ENST00000340006 SLC16A3O15427 465 aaKnown RBP16.05■□□□□ 0.16
CSRP1-201ENST00000340006 MGEA5O60502 916 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 SERPINC1P01008 464 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 TPM2P07951 284 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 ATP1A3P13637 1013 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
CSRP1-201ENST00000340006 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 IKBKEQ14164 716 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 FRMD5Q7Z6J6 570 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
CSRP1-201ENST00000340006 HACE1Q8IYU2 909 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 CEP120Q8N960 986 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 BADQ92934 168 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 SNTG2Q9NY99 539 aa16.05■□□□□ 0.16
CSRP1-201ENST00000340006 RBAKQ9NYW8 714 aaPredicted RBP16.05■□□□□ 0.16
CSRP1-201ENST00000340006 CXCL10P02778 98 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 CLTAP09496 248 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 SPAG1Q07617 926 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 CDKAL1Q5VV42 579 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 RTN4RL1Q86UN2 441 aaPredicted RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 FBXL18Q96ME1 805 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 IPPQ9Y573 584 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 TANC1Q9C0D5 1861 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 ENPP3O14638 875 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 SKIP12755 728 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 AKAP5P24588 427 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 DSC3Q14574 896 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 DCAF17Q5H9S7 520 aaPredicted RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 INTS8Q75QN2 995 aaKnown RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 TMEM192Q8IY95 271 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 PDLIM2Q96JY6 352 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 VPS16Q9H269 839 aa16.04■□□□□ 0.16
CSRP1-201ENST00000340006 NXF3Q9H4D5 531 aaKnown RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 CPSF3Q9UKF6 684 aaKnown RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
CSRP1-201ENST00000340006 A0A0U1RQF3 1178 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 ACRP10323 421 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 DLATP10515 647 aaKnown RBP16.03■□□□□ 0.16
CSRP1-201ENST00000340006 ITGA4P13612 1032 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 ZNF18P17022 549 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 GRM5P41594 1212 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 VAMP7P51809 220 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 CNKSR3Q6P9H4 555 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 USP37Q86T82 979 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 MFSD14AQ96MC6 490 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
CSRP1-201ENST00000340006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.03■□□□□ 0.16
CSRP1-201ENST00000340006 CITO14578 2027 aa16.03■□□□□ 0.16
CSRP1-201ENST00000340006 TRIP11Q15643 1979 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 MAPK13O15264 365 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 CXCL8P10145 99 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 TNNI1P19237 187 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 RAB27AP51159 221 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 CYP24A1Q07973 514 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.16
CSRP1-201ENST00000340006 PGBD4Q96DM1 585 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
CSRP1-201ENST00000340006 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 MMRN2Q9H8L6 949 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 PDE11AQ9HCR9 933 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 TOPORSQ9NS56 1045 aaPredicted RBP16.02■□□□□ 0.16
CSRP1-201ENST00000340006 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.16
CSRP1-201ENST00000340006 FAM189A1O60320 539 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 ADRB2P07550 413 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 FANCCQ00597 558 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 FPGSQ05932 587 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 BFSP1Q12934 665 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 PPIGQ13427 754 aaKnown RBP eCLIP16.02■□□□□ 0.15
CSRP1-201ENST00000340006 KRT31Q15323 416 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.15
CSRP1-201ENST00000340006 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.15
CSRP1-201ENST00000340006 FAM43BQ6ZT52 329 aaPredicted RBP16.02■□□□□ 0.15
CSRP1-201ENST00000340006 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.15
CSRP1-201ENST00000340006 TRAIPQ9BWF2 469 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms