RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PTGISQ16647 500 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CACNA2D4Q7Z3S7 1137 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SERINC5Q86VE9 423 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 OR8K1Q8NGG5 319 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 WNT8BQ93098 351 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 GANQ9H2C0 597 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NLRC4Q9NPP4 1024 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RBAK-RBAKDNI3L0D1 243 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 MXI1P50539 228 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 MRPS6P82932 125 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ENPEPQ07075 957 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 KLHDC7AQ5VTJ3 777 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RSPH3Q86UC2 560 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ZNF710Q8N1W2 664 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CEP120Q8N960 986 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ZNF397Q8NF99 534 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 FAM84AQ96KN4 292 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 DNAJC7Q99615 494 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SIX2Q9NPC8 291 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PLCB1Q9NQ66 1216 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CEP72Q9P209 647 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CPSF3Q9UKF6 684 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
CDK5RAP3-201ENST00000338399 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 M0QZ92 97 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 P4HA2O15460 535 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 MCF2P10911 925 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TNNI1P19237 187 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CETN1Q12798 172 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 KRT39Q6A163 491 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 BRSK2Q8IWQ3 736 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 DEFB118Q96PH6 123 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 EDEM3Q9BZQ6 932 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TRMT13Q9NUP7 481 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CDY2AQ9Y6F7 541 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ANK1P16157 1881 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 KBTBD13C9JR72 458 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CCL5P13501 91 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 GTF2H1P32780 548 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NCBP1Q09161 790 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TSR1Q2NL82 804 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 EPC2Q52LR7 807 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RRAGAQ7L523 313 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 EHBP1Q8NDI1 1231 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 LMO3Q8TAP4 145 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 KIAA1524Q8TCG1 905 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 BAP1Q92560 729 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RNF208Q9H0X6 261 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TRPV2Q9Y5S1 764 aa15.99■□□□□ 0.15
CDK5RAP3-201ENST00000338399 LRRC53A6NM62 1247 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PMM2O15305 246 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 LRRN2O75325 713 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CTSHP09668 335 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 UCHL3P15374 230 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CLDN10P78369 228 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 GJB7Q6PEY0 223 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SV2AQ7L0J3 742 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ADPGKQ9BRR6 497 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 FHOD1Q9Y613 1164 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ARHGAP6O43182 974 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 STAG3L1P0CL83 205 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 FECHP22830 423 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 THPOP40225 353 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ENOX2Q16206 610 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 WDR59Q6PJI9 974 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CGRRF1Q99675 332 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NPTXRO95502 500 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CHRNA1P02708 482 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 HSPA8P11142 646 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PTK7Q13308 1070 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 NOTUMQ6P988 496 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 RPAINQ86UA6 219 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TAS1R2Q8TE23 839 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SEMA4DQ92854 862 aa15.97■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CHP1Q99653 195 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms