RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 PURAQ00577 322 aaKnown RBP16.76■□□□□ 0.27
LIMS1-202ENST00000338045 MAP2K1Q02750 393 aaPredicted RBP16.76■□□□□ 0.27
LIMS1-202ENST00000338045 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
LIMS1-202ENST00000338045 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
LIMS1-202ENST00000338045 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
LIMS1-202ENST00000338045 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
LIMS1-202ENST00000338045 SMIM35A0A1B0GVV1 85 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 ZEB2O60315 1214 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 LRRN2O75325 713 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 MYL3P08590 195 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 STAT1P42224 750 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 CDC42EP1Q00587 391 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 KLHL30Q0D2K2 578 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
LIMS1-202ENST00000338045 TDRD12Q587J7 1177 aaKnown RBP16.75■□□□□ 0.27
LIMS1-202ENST00000338045 FMNL3Q8IVF7 1028 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 FBXL13Q8NEE6 735 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 KIF18AQ8NI77 898 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
LIMS1-202ENST00000338045 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 TCHPQ9BT92 498 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 DEF6Q9H4E7 631 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 PDE11AQ9HCR9 933 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 LZTFL1Q9NQ48 299 aa16.75■□□□□ 0.27
LIMS1-202ENST00000338045 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 AKR1B10O60218 316 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 TRPA1O75762 1119 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 SOX5P35711 763 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
LIMS1-202ENST00000338045 HIC1Q14526 733 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 SPA17Q15506 151 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 ZACNQ401N2 412 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 TAS1R2Q8TE23 839 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 HAUS4Q9H6D7 363 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 RAB20Q9NX57 234 aa16.74■□□□□ 0.27
LIMS1-202ENST00000338045 CPSF3Q9UKF6 684 aaKnown RBP16.74■□□□□ 0.27
LIMS1-202ENST00000338045 R3HCC1Q9Y3T6 440 aaKnown RBP16.74■□□□□ 0.27
LIMS1-202ENST00000338045 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
LIMS1-202ENST00000338045 FERP16591 822 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ANXA13P27216 316 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 TRIM32Q13049 653 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ARHGAP29Q52LW3 1261 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ZBTB33Q86T24 672 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 GPIHBP1Q8IV16 184 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 NLRP7Q8WX94 980 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ADAMTS10Q9H324 1103 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 SRRDQ9UH36 339 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 FANCGO15287 622 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ZC3H11AO75152 810 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ABL1P00519 1130 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
LIMS1-202ENST00000338045 HARSP12081 509 aaKnown RBP16.73■□□□□ 0.27
LIMS1-202ENST00000338045 TNFSF9P41273 254 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 VAV2P52735 878 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 CYP27A1Q02318 531 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ARID5AQ03989 594 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 SLC18A3Q16572 532 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 PPP1R16BQ96T49 567 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 CDT1Q9H211 546 aa16.73■□□□□ 0.27
LIMS1-202ENST00000338045 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
LIMS1-202ENST00000338045 EVI5O60447 810 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 GPR32O75388 356 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 RARBP10826 455 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 CYP2C9P11712 490 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 TNNI1P19237 187 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 HOXD10P28358 340 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 VEGFBP49765 207 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 TERF1P54274 439 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 PTK2Q05397 1052 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 SEZ6Q53EL9 994 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 ZNF571Q7Z3V5 609 aaPredicted RBP16.72■□□□□ 0.27
LIMS1-202ENST00000338045 HELQQ8TDG4 1101 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 PCDHA13Q9Y5I0 950 aa16.72■□□□□ 0.27
LIMS1-202ENST00000338045 RCCD1A6NED2 376 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 CSDE1O75534 798 aaKnown RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 ARF4P18085 180 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 AP3M2P53677 418 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 CHMP4BP1P59074 171 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GNG11P61952 73 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 POU5F1Q01860 360 aaKnown RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 SURF1Q15526 300 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 TDRD10Q5VZ19 366 aaKnown RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 RUFY4Q6ZNE9 571 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 KIAA1328Q86T90 577 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 CD99L2Q8TCZ2 262 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 MTG1Q9BT17 334 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms