RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 AADACL2Q6P093 401 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 LRRC74BQ6ZQY2 392 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 TRIM42Q8IWZ5 723 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 LARGE2Q8N3Y3 721 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 THAP11Q96EK4 314 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 INTS2Q9H0H0 1204 aaKnown RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 RANBP17Q9H2T7 1088 aaKnown RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 FOXO6A8MYZ6 492 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 COILP38432 576 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 RPL21P46778 160 aaKnown RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ARSEP51690 589 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 RCAN1P53805 252 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 IRGCQ6NXR0 463 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 RFX6Q8HWS3 928 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 SERPINB12Q96P63 405 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ISCA1Q9BUE6 129 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 CLIC5Q9NZA1 410 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 KRT36O76013 467 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 MAGEA4P43358 317 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 IGBP1P78318 339 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 TROAPQ12815 778 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 DAB2IPQ5VWQ8 1189 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 TRIM74Q86UV6 250 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 TRIM73Q86UV7 250 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 NUDCD3Q8IVD9 361 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 KIAA1683Q9H0B3 1180 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 NEUROG2Q9H2A3 272 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 TACC3Q9Y6A5 838 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 FAM205AQ6ZU69 1335 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 KRT4P19013 534 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 ART3Q13508 389 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 CNGA2Q16280 664 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 DGKHQ86XP1 1220 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 FAM81BQ96LP2 452 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 PPP1R36Q96LQ0 422 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
COL2A1-201ENST00000337299 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 RIPK2O43353 540 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 TMCC1O94876 653 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 EEF1DP29692 281 aaKnown RBP14.04□□□□□ -0.16
COL2A1-201ENST00000337299 MAGEB18Q96M61 343 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 NDNQ99608 321 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 AGPAT1Q99943 283 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 WNT8AQ9H1J5 351 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 ADAM22Q9P0K1 906 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
COL2A1-201ENST00000337299 UTYO14607 1347 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 ITIH2P19823 946 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 PTPN4P29074 926 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 SCNN1BP51168 640 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 PRKG1Q13976 671 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 PKN1Q16512 942 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 CENPPQ6IPU0 288 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 ARID3BQ8IVW6 561 aaPredicted RBP14.04□□□□□ -0.16
COL2A1-201ENST00000337299 POMGNT1Q8WZA1 660 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 FAXDC2Q96IV6 333 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 SH3GLB2Q9NR46 395 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 GALNT8Q9NY28 637 aa14.04□□□□□ -0.16
COL2A1-201ENST00000337299 DIP2BQ9P265 1576 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 NDC80O14777 642 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 CYP26A1O43174 497 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 HNRNPRO43390 633 aaKnown RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 NMT1P30419 496 aaKnown RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 CAV1Q03135 178 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 TBC1D9BQ66K14 1250 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 RHPN2Q8IUC4 686 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 SCYL1Q96KG9 808 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 CNBD2Q96M20 576 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ZWILCHQ9H900 591 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 SLCO1B3Q9NPD5 702 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 SMG5Q9UPR3 1016 aaKnown RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 NAALADL1Q9UQQ1 740 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 PCDHB4Q9Y5E5 795 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ATXN2Q99700 1313 aaKnown RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 UNC5CO95185 931 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ATP6V1C1P21283 382 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 CA8P35219 290 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 STAT2P52630 851 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ARL4CP56559 192 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 PGM2Q96G03 612 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 FAM210AQ96ND0 272 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 TRPV6Q9H1D0 765 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 EXOC7Q9UPT5 735 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 NEU2Q9Y3R4 380 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 TTLL3Q9Y4R7 772 aa14.03□□□□□ -0.16
COL2A1-201ENST00000337299 MYCLP12524 364 aaPredicted RBP14.03□□□□□ -0.16
COL2A1-201ENST00000337299 SLC34A1Q06495 639 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms