RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PPP6R3Q5H9R7 873 aaPredicted RBP8.79□□□□□ -1
HPS4-201ENST00000336873 DACT2Q5SW24 774 aa8.79□□□□□ -1
HPS4-201ENST00000336873 TAOK1Q7L7X3 1001 aa8.79□□□□□ -1
HPS4-201ENST00000336873 FBXL13Q8NEE6 735 aa8.79□□□□□ -1
HPS4-201ENST00000336873 KLHL29Q96CT2 875 aa8.79□□□□□ -1
HPS4-201ENST00000336873 CYFIP2Q96F07 1278 aa8.79□□□□□ -1
HPS4-201ENST00000336873 VIPAS39Q9H9C1 493 aa8.79□□□□□ -1
HPS4-201ENST00000336873 HEY1Q9Y5J3 304 aa8.79□□□□□ -1
HPS4-201ENST00000336873 CCDC188H7C350 402 aa8.79□□□□□ -1
HPS4-201ENST00000336873 ATP2A1O14983 1001 aa8.79□□□□□ -1
HPS4-201ENST00000336873 MEFVO15553 781 aaPredicted RBP8.79□□□□□ -1
HPS4-201ENST00000336873 ATP11AP98196 1134 aa8.79□□□□□ -1
HPS4-201ENST00000336873 CUL1Q13616 776 aa8.79□□□□□ -1
HPS4-201ENST00000336873 GLE1Q53GS7 698 aaKnown RBP8.79□□□□□ -1
HPS4-201ENST00000336873 NBPF12Q5TAG4 269 aaPredicted RBP8.79□□□□□ -1
HPS4-201ENST00000336873 TRIM50Q86XT4 487 aa8.79□□□□□ -1
HPS4-201ENST00000336873 PALM2Q8IXS6 379 aa8.79□□□□□ -1
HPS4-201ENST00000336873 PAF1Q8N7H5 531 aa8.79□□□□□ -1
HPS4-201ENST00000336873 RAPGEF5Q92565 580 aa8.79□□□□□ -1
HPS4-201ENST00000336873 ERP44Q9BS26 406 aa8.79□□□□□ -1
HPS4-201ENST00000336873 KCNMB3Q9NPA1 279 aa8.79□□□□□ -1
HPS4-201ENST00000336873 ASTN2O75129 1339 aaPredicted RBP8.78□□□□□ -1
HPS4-201ENST00000336873 NR3C2P08235 984 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ZSCAN5DPP0CG00 497 aa8.78□□□□□ -1
HPS4-201ENST00000336873 RALAP11233 206 aa8.78□□□□□ -1
HPS4-201ENST00000336873 CLNS1AP54105 237 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 YWHAGP61981 247 aaKnown RBP eCLIP8.78□□□□□ -1
HPS4-201ENST00000336873 CHADLQ6NUI6 762 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ARHGAP27Q6ZUM4 889 aa8.78□□□□□ -1
HPS4-201ENST00000336873 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
HPS4-201ENST00000336873 RHPN2Q8IUC4 686 aa8.78□□□□□ -1
HPS4-201ENST00000336873 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
HPS4-201ENST00000336873 MXRA8Q9BRK3 442 aa8.78□□□□□ -1
HPS4-201ENST00000336873 POLR3FQ9H1D9 316 aaPredicted RBP8.78□□□□□ -1
HPS4-201ENST00000336873 ISCUQ9H1K1 167 aa8.78□□□□□ -1
HPS4-201ENST00000336873 EPN3Q9H201 632 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GANQ9H2C0 597 aa8.78□□□□□ -1
HPS4-201ENST00000336873 HOMER3Q9NSC5 361 aa8.78□□□□□ -1
HPS4-201ENST00000336873 RAB20Q9NX57 234 aa8.78□□□□□ -1
HPS4-201ENST00000336873 G3BP2Q9UN86 482 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 COL18A1P39060 1754 aa8.78□□□□□ -1
HPS4-201ENST00000336873 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
HPS4-201ENST00000336873 SHANK3Q9BYB0 1731 aa8.78□□□□□ -1
HPS4-201ENST00000336873 CCDC78A2IDD5 438 aa8.78□□□□□ -1
HPS4-201ENST00000336873 WDR64B1ANS9 1081 aa8.78□□□□□ -1
HPS4-201ENST00000336873 KITP10721 976 aa8.78□□□□□ -1
HPS4-201ENST00000336873 DPEP1P16444 411 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GNA15P30679 374 aa8.78□□□□□ -1
HPS4-201ENST00000336873 CORO7P57737 925 aa8.78□□□□□ -1
HPS4-201ENST00000336873 NOP14P78316 857 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 GPS1Q13098 491 aa8.78□□□□□ -1
HPS4-201ENST00000336873 PTGISQ16647 500 aa8.78□□□□□ -1
HPS4-201ENST00000336873 UGCGQ16739 394 aa8.78□□□□□ -1
HPS4-201ENST00000336873 CIAPIN1Q6FI81 312 aa8.78□□□□□ -1
HPS4-201ENST00000336873 MCF2L2Q86YR7 1114 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ZBED8Q8IZ13 594 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ETNPPLQ8TBG4 499 aa8.78□□□□□ -1
HPS4-201ENST00000336873 MICAL1Q8TDZ2 1067 aa8.78□□□□□ -1
HPS4-201ENST00000336873 YY1AP1Q9H869 796 aa8.78□□□□□ -1
HPS4-201ENST00000336873 NGRNQ9NPE2 291 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 AIPL1Q9NZN9 384 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
HPS4-201ENST00000336873 PITPNM2Q9BZ72 1349 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 CYP3A4P08684 503 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GCLCP48506 637 aaPredicted RBP8.78□□□□□ -1
HPS4-201ENST00000336873 RARRES1P49788 294 aa8.78□□□□□ -1
HPS4-201ENST00000336873 ZNF844Q08AG5 666 aa8.78□□□□□ -1
HPS4-201ENST00000336873 FAXCQ5TGI0 409 aa8.78□□□□□ -1
HPS4-201ENST00000336873 SV2AQ7L0J3 742 aa8.78□□□□□ -1
HPS4-201ENST00000336873 NOP9Q86U38 636 aaKnown RBP8.78□□□□□ -1
HPS4-201ENST00000336873 RHOT2Q8IXI1 618 aa8.78□□□□□ -1
HPS4-201ENST00000336873 LRRC34Q8IZ02 419 aa8.78□□□□□ -1
HPS4-201ENST00000336873 RNF169Q8NCN4 708 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.78□□□□□ -1
HPS4-201ENST00000336873 HVCN1Q96D96 273 aa8.78□□□□□ -1
HPS4-201ENST00000336873 CHST7Q9NS84 486 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GINM1Q9NU53 330 aa8.78□□□□□ -1
HPS4-201ENST00000336873 DISP2A7MBM2 1401 aa8.78□□□□□ -1
HPS4-201ENST00000336873 GAKO14976 1311 aa8.78□□□□□ -1
HPS4-201ENST00000336873 A0A0G2JND7 137 aa8.77□□□□□ -1
HPS4-201ENST00000336873 EGFRP00533 1210 aa8.77□□□□□ -1
HPS4-201ENST00000336873 CREB1P16220 341 aa8.77□□□□□ -1
HPS4-201ENST00000336873 NPTX2P47972 431 aa8.77□□□□□ -1
HPS4-201ENST00000336873 SLC20A2Q08357 652 aa8.77□□□□□ -1
HPS4-201ENST00000336873 QPCTQ16769 361 aa8.77□□□□□ -1
HPS4-201ENST00000336873 GNPTABQ3T906 1256 aa8.77□□□□□ -1
HPS4-201ENST00000336873 EMC1Q8N766 993 aa8.77□□□□□ -1
HPS4-201ENST00000336873 NETO2Q8NC67 525 aa8.77□□□□□ -1
HPS4-201ENST00000336873 PIK3R5Q8WYR1 880 aa8.77□□□□□ -1
HPS4-201ENST00000336873 ATP6V0A1Q93050 837 aa8.77□□□□□ -1
HPS4-201ENST00000336873 SEC16BQ96JE7 1060 aa8.77□□□□□ -1
HPS4-201ENST00000336873 INPP4AQ96PE3 977 aaPredicted RBP8.77□□□□□ -1
HPS4-201ENST00000336873 FAM167BQ9BTA0 163 aa8.77□□□□□ -1
HPS4-201ENST00000336873 RBAKQ9NYW8 714 aaPredicted RBP8.77□□□□□ -1
HPS4-201ENST00000336873 SEPT10Q9P0V9 454 aa8.77□□□□□ -1
HPS4-201ENST00000336873 KLHL14Q9P2G3 628 aa8.77□□□□□ -1
HPS4-201ENST00000336873 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.77□□□□□ -1
HPS4-201ENST00000336873 BCORQ6W2J9 1755 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 LRP6O75581 1613 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms